Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1525 |
Symbol | |
ID | 8447123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1682919 |
End bp | 1684157 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040655 |
Product | transposase IS111A/IS1328/IS1533 |
Protein accession | YP_003200912 |
Protein GI | 258651756 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.337763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCCCTGC CTGAATGCGA TTTCTACGTC GGTATCGATT GGGCCGCCGA AACGCACGCC GTGTGTGTGC AGGACGCGGC CGGGAAGATC ACCGCGCAGT TCACGATCGA GCACACTGCC GACGGTTTCG CGACCCTGTT GGCCCGCCTG GGTCGGTTGG CCAGCGACCC GATGCAGGTC AGCGTCGCCC TGGAACGGCC CGACGGTCGG CTGGTCGACG CCCTGCTCGA AGCGGGCAAC CCGGTGGTGC CGGTCAGCCC GAACGCGATC AAGACCTGGC GCGACGGGGA GGTACTGTCC GGCGCCAAGT CCGACGCCGG CGACGCCGCC GTCATCGCCG AATATCTGCG GCTGCGGTCG CACCGGCTGC GGCCGGCCAC CCCGTTCACC CCGGCGACCA GGGCGCTGCG TACGGTCGTA CGCACCCGCG ATGACATCGT GGCCATGCGG ACCGCCACGG CGAACCAGCT GACCGCCCTG CTCGATGCCC ACTGGCCCGG CGCCACCAAG GTTTTCGCCG ATATCGAGTC GCCGATCGCG TTGGAGTTCC TGACCCGGTA CCCGACCGCC AAACACGCCG CGGGCCTGGG TGAGAAGCGC ATGGCCGCGT TCTGCGTCAA GCACGGCTAC TCCGGTCGCC GCTCGGCCGC GGAGCTGCTG ACCCGATTGC GGGCTGCGCC GGCCGGCACC ACCGACCCGG ACCTGGTCGA GGCCGTCCGG GACGCCGTGC TGGCGCTGGT GGCCGTGCTG CGCACCCTGG GCGAGACCCG CAAGGACCTG GACCGGTCGG TGACCGCCCA CCTCGGGGAG CGCCCGGACG CCGCGATCTT CACGTCGCTG CCAAGGTCGG GTCAGATCAA CGCCGCCCAG GTGCTCGCCG AGTGGGGCGA TTCTCGGCAA GCCTACGACT CGCCCGACGC CGTCGCGGCG TTGGCCGGCC TGACCCCGGT CACCAAAGCG TCCGGTAAAT ATCATGCCGT GCATTTCCGG TGGGCCTGCA ACAAACGATT CCGTAAAGCG ATGACCACGT TCGCCGACAA CAGTCGCCAC CAAAGCCCGT GGGCCGCCGA GGTCTACCGC AGAGCTATCC AACGCGGGCA CGACCACCCG CACGCCGTCC GGGTCCTGGC CCGCGCCTGG GTGCGCGTGA TCTACCGCTG CTGGCTCGAC CGAGAGCCTT ACGACCCGGC CAGGCACGGC AACGCGAACA AGATCAACAG CGGGCAACTT GCGGCCTGA
|
Protein sequence | MSLPECDFYV GIDWAAETHA VCVQDAAGKI TAQFTIEHTA DGFATLLARL GRLASDPMQV SVALERPDGR LVDALLEAGN PVVPVSPNAI KTWRDGEVLS GAKSDAGDAA VIAEYLRLRS HRLRPATPFT PATRALRTVV RTRDDIVAMR TATANQLTAL LDAHWPGATK VFADIESPIA LEFLTRYPTA KHAAGLGEKR MAAFCVKHGY SGRRSAAELL TRLRAAPAGT TDPDLVEAVR DAVLALVAVL RTLGETRKDL DRSVTAHLGE RPDAAIFTSL PRSGQINAAQ VLAEWGDSRQ AYDSPDAVAA LAGLTPVTKA SGKYHAVHFR WACNKRFRKA MTTFADNSRH QSPWAAEVYR RAIQRGHDHP HAVRVLARAW VRVIYRCWLD REPYDPARHG NANKINSGQL AA
|
| |