| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1474 |
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| Symbol | |
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| ID | 8447070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1628627 |
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| End bp | 1629400 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645040603 |
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| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
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| Protein accession | YP_003200862 |
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| Protein GI | 258651706 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0595043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.186986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGG CCCGAATTGC CCATCCCGAC GGCGTTGCCT TCGTGGCCAT CGACGGGCCC
GACGGCAGCG AGCAGCGGGC CCGGGAGATC GCCGACCACC CGTTCGGCGC GCCGACCTTC
ACCGGCAAGT CCTGGCCGCT GGCCGATGTC CGGTTGCTGG CGCCGATCCT GCCGTCCAAG
GTGCTGTGCC TGGGTCGCAA CTTCCGCGAC CATGCGGCCG AGCTGGGCAA CCCCGTGCCG
ACCAGCCCGA TCCTGTTCAT GAAGCCCTCG ACCAGCGTCA TCGGGCCGAA CGCGGCGATC
AAGCTGCCGG CGAACTCGGC GCGGGTGGAC TACGAGGGCG AACTGGCCGT GGTCATCGGC
AAGCCCTGTC GGGACGTCAA GGCCGAGGAC GCCGCCTCGG TCATCCTGGG CTACACCGTC
GGCAACGACG TCACCGCCCG CGACCAGCAG AAGGCCGACG TTCAGTTCAC CCGGGCCAAG
AGCTACGACT CGTTCTGCCC GCTCGGCCCG TGGATCGAGA CCGAGCTGGA TCCCTCCGAG
TTGCGGATCA CCACCGAGCT GGACGACGTG GTCGTGCAGG ACGGGTCCAC CGCCGACATG
GTCTTCTCGA TCGGCGAGTT CCTGGAGTAC GTCAGCGGCA TCATGACGCT GCTGCCCGGC
GACGTCCTGC TCACCGGCAC CCCGGCCGGC GTCGGGCCCA TGGTCGCCGG CCAGAGCATC
TCCATCACCG TCGAGGGCAT CGGCACCCTG ACCAATCCCA TCCAGGCCCG CTGA
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| Protein sequence | MRLARIAHPD GVAFVAIDGP DGSEQRAREI ADHPFGAPTF TGKSWPLADV RLLAPILPSK
VLCLGRNFRD HAAELGNPVP TSPILFMKPS TSVIGPNAAI KLPANSARVD YEGELAVVIG
KPCRDVKAED AASVILGYTV GNDVTARDQQ KADVQFTRAK SYDSFCPLGP WIETELDPSE
LRITTELDDV VVQDGSTADM VFSIGEFLEY VSGIMTLLPG DVLLTGTPAG VGPMVAGQSI
SITVEGIGTL TNPIQAR
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