Gene Namu_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1401 
Symbol 
ID8446997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1551857 
End bp1552678 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID645040532 
Producttransglutaminase domain protein 
Protein accessionYP_003200791 
Protein GI258651635 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0191843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.458013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACCC GCAGACTGTC GATCGGCTGC GATTTCCGGT ACTCCGCGGC CGTGCCGACC 
CCGGCGGTGG TGCAGGTGAC GCCGCTGGGC GGCGAGGGCG TCAGCATCGA GGTCGAGCAG
TGGTACCTGG AGCCCGCCCA GGACCGCACC CACGAGTACC GCGACCTGTA CGGCAACCGC
TGCCAGCGGA TGGTGCTGCC GGCCGGCAGC TCGCGCATCG GCTACCAGGC CCTGGTCACG
GTGCCCGACG CCACCGAGGA CGCCGACCCG TCCGCCCCCG AATGGGCTCC GCAGGCGCTG
CCCGACGACG TCCTGGTCTA TCTGATGCCG AGCCGGTACT GCCTGCCGGA CATGCTCGGC
CAGGAGGCGT GGTCCCGGTT CAGCCTCATC CCGCCCGGCT ACGGCCGGGT CCAGGCCATC
TGCGACCACG TCAACAACCA CCTGCAGTTC GCCTACGGCA GCAGTTCTCC GACCTCGACG
GCCGTCGACG TGAACACCTC CGGGTTCGGC GTCTGCCGCG ACTTCACCCA CCTGGCGATC
ACCTTCTGCC GGGCGCTGAA CATCCCGGCC CGCTACGTCT TCGGTTACCT GCCCGACCTG
GACGTGCCGG TCGACCCGGC GCCGATGGAC TTCGCCGCCT GGATGGAGGT CTGGCTGGGC
GACCGCTGGT GGACCTTCGA TCCCCGCAAC AACCGGCGCC GCAAGGGTCG GGTGCTGATC
GGCCGCGGCC GGGACGCCTC CGACGTCGCC ATGATCACCT CGTTCGGTGG TCCCACCCTG
GAGTCGATGT CGGTGATCGC GCACGAAGTG GTCGGCCAGT AG
 
Protein sequence
MGTRRLSIGC DFRYSAAVPT PAVVQVTPLG GEGVSIEVEQ WYLEPAQDRT HEYRDLYGNR 
CQRMVLPAGS SRIGYQALVT VPDATEDADP SAPEWAPQAL PDDVLVYLMP SRYCLPDMLG
QEAWSRFSLI PPGYGRVQAI CDHVNNHLQF AYGSSSPTST AVDVNTSGFG VCRDFTHLAI
TFCRALNIPA RYVFGYLPDL DVPVDPAPMD FAAWMEVWLG DRWWTFDPRN NRRRKGRVLI
GRGRDASDVA MITSFGGPTL ESMSVIAHEV VGQ