Gene Namu_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1400 
Symbol 
ID8446996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1551366 
End bp1551845 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID645040531 
ProductybaK/ebsC protein 
Protein accessionYP_003200790 
Protein GI258651634 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.017651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.427861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCG CACCGACTCC GGCGATCGCC GTGCTCACCC GCGCGAAGGT CGCCCACACC 
CTGCAGCCGT ACCACCACGA CCCGGCGACC ACCGCCTTCG GCGACGAGGT CGTGCAGGCC
CTGGGCTGGC CGGCGGACCG AGTGTTCAAG ACCCTGGTGG CCACGGTCGA CGGGAAGCTG
ACGGTCGGGA TCGTGCCCGT CGCCGCCCAG CTGGACCTCA AGGCGCTGGC CGCCGCCGCC
GGCGGCAAGA AGGCCGGCAT GGCCAAGGTC GCGGACGCCG AACGCTCCTC CGGGTACGTC
GCCGGCGGCA TCTCACCACT GGGGCAACGC AAGCCGCTAC CGACCGTGAT CGATGAGACG
GCGACACTGT TCGACACCAT CATGGTCAGC GCCGGGCGTC GCGGCCTGCA GGTGGAGCTG
GCTCCCGACC AGCTGGCCAG ACTGACCCGG GCAATCTTCG CCCCCATTGC ATCAGGATGA
 
Protein sequence
MAGAPTPAIA VLTRAKVAHT LQPYHHDPAT TAFGDEVVQA LGWPADRVFK TLVATVDGKL 
TVGIVPVAAQ LDLKALAAAA GGKKAGMAKV ADAERSSGYV AGGISPLGQR KPLPTVIDET
ATLFDTIMVS AGRRGLQVEL APDQLARLTR AIFAPIASG