Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1384 |
Symbol | |
ID | 8446980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1527474 |
End bp | 1528760 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 645040516 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003200775 |
Protein GI | 258651619 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.386468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00702325 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCACCG CACTGGCTCC CTGGCCCGCC CCGACCGCCG ATGCACCGGT GACCGCCACG GTCCCCGTGC CCGGCTCCAA GTCGCTGACC AACCGGGCCC TGGTGCTCGC GGCGCAGGCC GTGGCGCCGT CGTTGATCCC GGCTCCGCTG CGCAGCCGGG ACACCGACCT GATGGCCGCG GCGCTGCGGG CCCTGGGCAC CGGCATCGAG TCCGCCGGCC CGGGGGGACG GGACTGGCTG GTGACGCCGG CGCCACTGGC CGGTCCGGCC CACGTGGACT GCGGGCTGGC CGGAACCGTG ATGCGGTTCC TGCCGCCGCT GGCCGCGACG GCCACCGGAC CGATCATCTT CGACGGCGAC GAGGCCGCCC GCCGGCGGCC GATGGCCACG GTGCTCGACG CACTGCGGGC GCTCGGGGTG CGCGTGGACG GCGACCGGCT GCCGTTCACC GTGCACGCCG ACGGCCGGGT CCCCGGCGGC ACGGTGCGGA TCGATGCCAG CGCCTCGTCG CAGTTCGTCT CCGGGCTCTT GCTGTCCGCC CCCTCCTTCG CCGGCGGCAT CGAGGTGCGG CACGAGGGCG CGGCCGTGCC CTCGTTGCCG CACATCGAGA TGACCGTGCA GGCGCTGCGC GGCGTCGGGG TGCGGGTCGA CGACGCGACC CCGGACCGGT GGCGGGTCGA GCCCGGGCCG GTCCAGCCGT GGACCAGCAC CATCGAGCCG GACCTGTCCA ACGCGACCCC GTTCCTGGCG GCCGCCGCAG TCACCGGCGG CACCGTCACC GTCCCGCACT GGCCCGCGGC CACCACCCAG GCCGGGGACG CCATCCGCGG CCTGCTCACC GCCATGGGCG CGCGGGTGTC GATCGGACCG GACGGGCTGA CCGTCTCCGG GCCGGACCGG CTGCGCGGGC TGACCGCCGA CCTGCACGAC GTCGGCGAGC TGACCCCGAC CGTGGCGGCC ATCGCCCTGT TCGCCGACGG ACCGTCCCGG CTGACCGGGA TCGGTCACCT GCGCGGGCAC GAGACCGACC GGCTGGCCGC GCTGGCCCAG GACATCCAGG CGGTCGGCGG CCGGGTCGAC GAGGCGCCGG ACGGGTTCAC CATTCACCCC CAACCGCTGC ACGGGGGCCC CTGGGCCGCC TTCGCCGACC ACCGGATGGC CACGGCCGGA GCCATCGTCG GGCTGCGGGT GCCCGGGGTG CTCGTCGACG ACGTGGCGAC CACGGCCAAG ACCCTGCCCG GGTTCGCGGA CATGTGGACG CGGATGCTCG GCCCGGCGGT GGCATGA
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Protein sequence | MTTALAPWPA PTADAPVTAT VPVPGSKSLT NRALVLAAQA VAPSLIPAPL RSRDTDLMAA ALRALGTGIE SAGPGGRDWL VTPAPLAGPA HVDCGLAGTV MRFLPPLAAT ATGPIIFDGD EAARRRPMAT VLDALRALGV RVDGDRLPFT VHADGRVPGG TVRIDASASS QFVSGLLLSA PSFAGGIEVR HEGAAVPSLP HIEMTVQALR GVGVRVDDAT PDRWRVEPGP VQPWTSTIEP DLSNATPFLA AAAVTGGTVT VPHWPAATTQ AGDAIRGLLT AMGARVSIGP DGLTVSGPDR LRGLTADLHD VGELTPTVAA IALFADGPSR LTGIGHLRGH ETDRLAALAQ DIQAVGGRVD EAPDGFTIHP QPLHGGPWAA FADHRMATAG AIVGLRVPGV LVDDVATTAK TLPGFADMWT RMLGPAVA
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