Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1304 |
Symbol | |
ID | 8446900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1431088 |
End bp | 1432518 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040437 |
Product | L-serine dehydratase 1 |
Protein accession | YP_003200696 |
Protein GI | 258651540 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00039374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.309635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGATCA GCGTGTTCGA CCTGTTTAAG GTCGGCATCG GTCCGTCCAG CTCGCACACC GTCGGGCCGA TGCGGGCGGC CCTGCTGTTC ACCGAGGAGC TGACCGAGCG GGGGATCACC CCGGCCCGGG TCCGGGTCGA GCTGTTCGGC TCGTTGGGGG CGACCGGTCA CGGGCACGGC ACCGTCACCG CGGTCATGCT CGGGCTGCAG GGACACGCCC CGGACACCGT CGACCCCCGG GCCGCCGGCC CGTCGGTGCA GCAGGTGGCC AGTACGCACC GGCTGACGCT GCCGGGCGGC CCGACGATCG ACTTCGACCC GGACCGGGAC ATCGTGCTGC ACCGCCGGCG GCGGCTGGAT TTTCACACCA ATGGCATGCA GTTCCACGCC TACGGCGAGA CCGGTCCCGG AATCGCCCCC GAGGCCGACC CCGAGACCGC TGAGCCGGTG CTGAGCCGGA CGTACTTCTC GGTGGGTGGT GGGTTCATCC TCGGCGAGGA CGAGACCGGT GAGCAGGCCG TGGTGCCGGA CAGCACCCCG GTGCCCTACC CGTTCCGCAC GGCCGCCGAG TTGCTCGCGC ACACCCGGGC CACCGGCCGG TCGATCAGCT GGATCATGCT GCAGAACGAG CTGGTGCAGC GGACCGAGCA GCAGGTCCGG GACGGCCTGC TGCACATCTG GTCGGTGATG CGCGAGTGCG TGGACCAGGG TTGCCGGGCG ACCGGGGTGC TGCCCGGCGG GCTCAAGGTC CGCCGCCGTG CGCACACCCT GCACCAGCAG CTGCTGGCCG CCGACGGGAC CGGCGATCCG TTGCACGCGA TGGAATGGAT CACCCTGTAC GCGTTGGCGG TGAACGAGGA GAACGCCGCC GGGGGACGGG TGGTCACCGC GCCCACCAAC GGGGCGGCCG GCATCGTGCC GGCGGTGTTG CACTACTACC GGCGATTCGT CCCCGGCGCC GACGACGACG GCGTGGTCCG GTTCCTGTTG GCCGCCGCGG CCATCGGCAT CCTGTTCAAG GAGGGGGCGT CCATCTCCGG TGCCGAGGTC GGCTGCCAGG GCGAGGTCGG CTCGGCCTGT GCGATGGCCG CCGGTGGTCT GGCCGAGGTG CTGGGCGGCA CTGCCGAGCA TGTCGAGAAC GCGGCCGAGA TCGGCATCGA ACACAACCTG GGCCTGACCT GCGATCCGGT CGGCGGCCTG GTCCAGATCC CGTGCATCGA ACGCAACGCG GTCGCTTCGG TCAAGGCGAT CACCGCGGCC CGGATGGCCA TCCTGGGCGA CGGGCAGCAT CACGTCTCCC TGGACAAGGC GATCCGGACG ATGCGCGAGA CCGGCGCCGA CATGAGCGTG AAGTACAAGG AAACCGCCCG CGGCGGGCTG GCCCTGCACG TGATCCCGGT GAACATCCCG GTCAACATCG TCGAATGCTG A
|
Protein sequence | MAISVFDLFK VGIGPSSSHT VGPMRAALLF TEELTERGIT PARVRVELFG SLGATGHGHG TVTAVMLGLQ GHAPDTVDPR AAGPSVQQVA STHRLTLPGG PTIDFDPDRD IVLHRRRRLD FHTNGMQFHA YGETGPGIAP EADPETAEPV LSRTYFSVGG GFILGEDETG EQAVVPDSTP VPYPFRTAAE LLAHTRATGR SISWIMLQNE LVQRTEQQVR DGLLHIWSVM RECVDQGCRA TGVLPGGLKV RRRAHTLHQQ LLAADGTGDP LHAMEWITLY ALAVNEENAA GGRVVTAPTN GAAGIVPAVL HYYRRFVPGA DDDGVVRFLL AAAAIGILFK EGASISGAEV GCQGEVGSAC AMAAGGLAEV LGGTAEHVEN AAEIGIEHNL GLTCDPVGGL VQIPCIERNA VASVKAITAA RMAILGDGQH HVSLDKAIRT MRETGADMSV KYKETARGGL ALHVIPVNIP VNIVEC
|
| |