| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1029 |
|---|
| Symbol | |
|---|
| ID | 8446625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1136363 |
|---|
| End bp | 1137541 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645040168 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_003200427 |
|---|
| Protein GI | 258651271 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGGAG CACTTCAGCA GCACATCACC GCCGAGCTCG ACGGCATCCG CGAGGCCGGC
CTGACCAAGC GGGAGCGGTC GATCAGCGGT CCGCAGGGCA CCGAGATCGT CGCCGATGGC
CAGCCGGTGC TCAACTTCTG CGCCAACAAC TATCTCGGCC TGGCCGACGA CCCGCGGCTG
CTGGACGCAG CCCGGGCCTC GCTGGACGAG TGGGGCTACG GGCTGGCCAG CGTCCGCTTC
ATCTGCGGCA CCCAGGAGCA GCATCGGGAG CTCGAGCGCC GGCTGGCCGG TTTCCTGGGC
ACCCAGGACG CCATCCTGTT CGCCTCCTGC TTCGACGCCA ACGGCGGCGT CTTCGAAACA
CTCTTCGGCG CCGAGGATGC CATCATCTCC GACGCGCTGA ACCACGCTTC GATCATCGAC
GGCATCCGGC TGTCCAAGGC CCGCCGGCTG CGGTACCGCA ACCGCGACAT GGTCGATCTG
GAGGAGCAGC TGCGCGCCGC GCAGGACGCC CGGTTCCGGA TCGTGGTCAC CGACGGCGTC
TTCTCCATGG ACGGCTACAT CGCCCCGCTG GCGCAGATCT GCGACCTGGC CGAGCGGTAC
GACGCCCTGG TCTTCGTCGA CGACTCGCAC GCCGTCGGCT TCATCGGTGA GAACGGCCGG
GGCACCCCCG AGCTGTGCGG GGTCGAGGGC CGGATCGACA TTTACACCGG CACCTTCGGC
AAGGCCCTCG GCGGCGCCTC CGGCGGCTAC GTCGCCGCGC ACGGCGAGAT CGTCGAGCTG
TTGCGGCAGC GCGCCCGGCC CTACCTGTTC TCCAACACGC TCGCCCCGGC GATGGTCGCC
GGCACGCTGG CCGCCCTCGA CCTGGTGGCC AGCTCGAACG AGCTGCGCAA GCGTCTGCAG
GAGAACGCGG CGCAGTTCCG GGCCGGCATG GCCGCGCACG GCTTCGACCT GCTGCCCGGC
GAGCATCCGA TCGTGCCGGT CATGTTCGGC GACGCCGCGC TGACCGCCCG GATCGCCGAC
GAGATGCAGC GCCAGGGCAT CTATGTCACC GCGTTCAGCT TCCCGGTGGT GCCGCGGGGC
GCGGCCCGCA TCCGGGTGCA GCTGTCCGCG GCGCACACCC CCGAGCAGAT CGACCGGTGC
GTCGCGGCGT TCGTCGCCGC CCGCGATCTG GCCGCCTGA
|
|---|
| Protein sequence | MYGALQQHIT AELDGIREAG LTKRERSISG PQGTEIVADG QPVLNFCANN YLGLADDPRL
LDAARASLDE WGYGLASVRF ICGTQEQHRE LERRLAGFLG TQDAILFASC FDANGGVFET
LFGAEDAIIS DALNHASIID GIRLSKARRL RYRNRDMVDL EEQLRAAQDA RFRIVVTDGV
FSMDGYIAPL AQICDLAERY DALVFVDDSH AVGFIGENGR GTPELCGVEG RIDIYTGTFG
KALGGASGGY VAAHGEIVEL LRQRARPYLF SNTLAPAMVA GTLAALDLVA SSNELRKRLQ
ENAAQFRAGM AAHGFDLLPG EHPIVPVMFG DAALTARIAD EMQRQGIYVT AFSFPVVPRG
AARIRVQLSA AHTPEQIDRC VAAFVAARDL AA
|
|---|
| |