| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0949 |
|---|
| Symbol | |
|---|
| ID | 8446541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1042400 |
|---|
| End bp | 1043158 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645040085 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003200348 |
|---|
| Protein GI | 258651192 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAC ATGACGACGC CGGTGCCGAT CGGGGTGCTG ATCGGGGGCT AGTCGTGGTG
GTGGAGGACG AGTCGGTCAT CGCCGACGTC ATCCGCCGCT ACCTGACCGC CGCCGGCTTC
GGCGTCCGGT GGTGCCGCAC GGGCCAAGAG GGGTTGGCCG CCGTCCGGAC CGACCGGCCC
ACCGCCGTGG TGCTCGACAT CGGGCTGCCG GACATGGACG GGCTGGACCT GTGCCGGCGG
CTGCGCGAGG CCGGCGATTG GACCCCGGTG TTGTTCGTCA CCGCCCGCGA CGAGGACGTC
GATCGCATCC TGGGTCTGGA ACTGGGCGGC GACGATTACC TGGTCAAACC GTTCAACCCG
CGCGAACTGG TCGCCCGCTT GCGGGCGGTG CTGCGCCGGA CCGGCGGCCC GGCGGCGGCC
GGGGGGACCA CCCTGCAGGT GGGCCGGGTG CGGATCGATC CCGGCCGGCG CCGGGTCTGG
GTCGAACCGG GACCGGGGGA GCCCGCACCC CGTCCGGTCG ACCTGACGGC GACCGAGTTC
GACCTGCTGG TGCACCTGGC CCGGCATCCG GGCCGGGTGT TCGAGCGGGC CGGGCTGCTC
AGCTCGGTGT GGGGGTACGC GAGTGCCGCC GGGGCCCGCA CCGTGGACGT CCACGTCGCC
GCGTTGCGCG CCAAACTGGG GACGGCCAGC CCCATCCGGA CCGTCCGGGG AGTCGGCTAC
TCGGCCGAGG ACCGGCCCGA AGCCGTCTCG CCGCGGTGA
|
|---|
| Protein sequence | MAAHDDAGAD RGADRGLVVV VEDESVIADV IRRYLTAAGF GVRWCRTGQE GLAAVRTDRP
TAVVLDIGLP DMDGLDLCRR LREAGDWTPV LFVTARDEDV DRILGLELGG DDYLVKPFNP
RELVARLRAV LRRTGGPAAA GGTTLQVGRV RIDPGRRRVW VEPGPGEPAP RPVDLTATEF
DLLVHLARHP GRVFERAGLL SSVWGYASAA GARTVDVHVA ALRAKLGTAS PIRTVRGVGY
SAEDRPEAVS PR
|
|---|
| |