Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0882 |
Symbol | |
ID | 8446474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 973925 |
End bp | 974758 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645040019 |
Product | transcriptional regulator, DeoR family |
Protein accession | YP_003200282 |
Protein GI | 258651126 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.262564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG GGCCCGGCCG GGGCGACGAT GCCGGGTGGC ACACCCGCAC TGCCAAGCAG CGGCAGCGGC AGCGGGAGAT CGCCGAACTC GTCGTCGCCG AGGGCACGGT GCGCATCGAG GATCTGATCG AGCGGTTCGG CGTCAGCGCC ATGACCGTGC ACCGCGATCT GGATCAACTG GAAAGCCAGG GGCTGCTGCG CAAGACCCGC GGTCAGGTGA CCGCGCTCAG CTCCAGCCTG ACCGAGTCGG GCATGACGTT CCGGCAGACC CAGCACAACG CCGAGAAGGA TGCGCTCGCC GTGGCCGCGC TGGAATTCAT CGAGCCCGGC CACAGCGTGT TCCTGGACGA CTCGACGACC GGCCTGCACC TGGCCCGGCT CCTGCCGCAA CGGGCGCCGC TCGGCGTGAT CACCCACTCG GCGGCGGTGG CCGCGGAACT CGCTCGGGAG CCACAGATCT CGCTGACCGT CGTCGGCGGC CTGTATCACT CCTGGTGCGA CGCCTACCTC GGGCAAATGA CGGTGGACGC CATCCGGCGG ATCCGGGCGG ACACCTTCGT GATGTCCACG GCCGCGATCA CCGACGACAT CTGCTTCTTC CAGACCCAGG ACACCATCGC GGTCAAGCGG GCGATGTTCG ACTCGTCCGC CCAGCGGATC CTGTACACCG ACCACACCAA ATTCGGTCAG CGGGCCTTGC ATGCGTTGCT CCCGCTGACC GAATTCGACG TCGTCATCGT TGACGAACTG ACCCCGGACG TGCATGTGGA TCGGTTGCGC CGCAAGGGGA TCGAGGTGGT GGTCGCGCCG GTGCCGGGAG CCGCCCAGGC CTAG
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Protein sequence | MTAGPGRGDD AGWHTRTAKQ RQRQREIAEL VVAEGTVRIE DLIERFGVSA MTVHRDLDQL ESQGLLRKTR GQVTALSSSL TESGMTFRQT QHNAEKDALA VAALEFIEPG HSVFLDDSTT GLHLARLLPQ RAPLGVITHS AAVAAELARE PQISLTVVGG LYHSWCDAYL GQMTVDAIRR IRADTFVMST AAITDDICFF QTQDTIAVKR AMFDSSAQRI LYTDHTKFGQ RALHALLPLT EFDVVIVDEL TPDVHVDRLR RKGIEVVVAP VPGAAQA
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