Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0763 |
Symbol | |
ID | 8446352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 841932 |
End bp | 843857 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645039900 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003200166 |
Protein GI | 258651010 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACCG CAACCGGGGA AATTCAGGCG GCCCCGACCG CCTCGCCCTC TGGGCTGACC CACAAACAGA TTCGCTTCAT CCTGTTCGGC CTGATGGCCG GCATGCTGCT GGCCGCCCTG GACCAGACGA TCGTGAGCAC CTCGATCCGG GTCATCGCCG ACGATCTGCA CGGGCTGTCC GCCCAGGCCT GGGTGACCAC CGCGTACCTG ATCACCTCCA CGGTGACCAC CCCGCTGTAC GGCAAGCTCT CGGACATCTA CGGCCGCCGG CCGATGTTCC TGACCGCCAT CAGCATCTTC ATCTTCGGCT CGCTGCTGTG CACGTTCTCC ACCTCGATGT ACGAGCTGGC CGCCTTCCGG GCCATCCAGG GCATCGGTGC CGGTGGTCTG TTCTCGATGG CCCTGGCCAT CCTGGCCGAC ATCGCCCCGC CGCGTGAGCG GGCCAAGTAC CAGGGCTACT TCCTGGCCGT GTTCGGCATG TCTTCGGTCG TCGGACCGCT GGTCGGCGGG TTCTTCGCCG GCGCCGAGAC GATCCTGGGC ATCGCCGGCT GGCGCTGGGT CTTCCTGGTC AACGTGCCGA TCGGCATCCT GGCCCTGGTC ATCGTCAGCA TCACCCTGCA CATCCCGCAC ATGCGGCACG ACCACCGGGT CGACTGGTGG GGTGCGACCG CGCTCATGGT CGGGTTGGTC CCGCTGCTGA TCGTGGCCGA GCAGGGCCGC GAGTGGGGCT GGATGTCCGG TTCGGTGCTG GGCCTGATCC TGCTGGGCAT CGTCGGTATC GCCGCCTTCA TCGCCATCGA GATCAAGATG AAGGACGAGG CGCTGATCCC GATGCGCCTG TTCCGCAGCC GGGTCTTCTC CACCGGCCTG GGCGCGAACG TGCTCATCGG TCTGGGCATG TTCGGTGCCC TGTCCACCCT GCCGCTGTAC CTGCAGCTGG TGAAGGGGGC GACCCCGACC GAGTCGGGCC TGCTGTTGAT CCCGATGATG GTCGGCATCA TGGGCGGCTC GGTGCTCTCC GGCCAGCTGA CCATGCGCAC CGGTCGGTAC AAGATCTTCC CGGTGATGGG CACCGCCCTG CTGACCGCGT CGTTCTTCCT GATGCTGACC GTGGACGTGG ACACCGGCTA CCCGCTGCTG GACCTGTACT TCGTGATGAT CGGCCTGGGG CTGGGCCTGT GCATGCAGAC CCTGCTGATC GCCGTGCAGA ACACGGTGCC GGCCAAGGAC ATGGGCGTGG CCACCTCGTC CGCGACCTTC TTCCGGCAGC TGGGCGGCAC CCTGGGTGTT GCGGTGTTCC TGTCGCTGCT GTTCAACTCG CTGCCTGACA AGATCCAGGG GGCGTTCCAG TCGGCGGCCG GTAACCCGGC GTTCCTGTCG GCGGTGCAGA CCGCGGCCCA GGATCCGAAC AGCCCGGGCC ACGCCACCGC GCTGGCCCTG GTCCAGGCGC AGACCAACCC GGCCGCCGCG GCGTCGGTGA CCGATGCGTT CAACAGCGAC TCGTCGTTCC TGAGCACGCT GGACGCCAAC ATCGCCCGGC CGTTCCAGGA GGGCTACGTC GCCTCCACCC AGTTGGTCTA CATCATCGGC GGCATCATCA TGGCCGTTGC CTTCGTCCTG GTGTTGACCA TGAAGGAGCT GCCGCTGCGC ACGCAGTCGG CGATCGACGA GCGGCTGGCC GAGCAGGCGG CCGAGGCCAA GGACGCCGAG GCGCTCTCGT TCGAGGGTGC CTTCAGCGCG GTCGACGCCG GCGACGCCAG CACCGCGGCG ACCACCCGGC CGACCACCGA GTCGACCTCC CCGTCGTCAT CGGGTGGCGG GCGGCATCAG GGTGGCCGGC ACAGTGCGGC CGACGAGGAC CTGGTCCCGG CGTGGGAGAT CGCCGGCGAC ACGGTCAGTC CGGGCGCCGG TCGGCATCGC GCCTGA
|
Protein sequence | MATATGEIQA APTASPSGLT HKQIRFILFG LMAGMLLAAL DQTIVSTSIR VIADDLHGLS AQAWVTTAYL ITSTVTTPLY GKLSDIYGRR PMFLTAISIF IFGSLLCTFS TSMYELAAFR AIQGIGAGGL FSMALAILAD IAPPRERAKY QGYFLAVFGM SSVVGPLVGG FFAGAETILG IAGWRWVFLV NVPIGILALV IVSITLHIPH MRHDHRVDWW GATALMVGLV PLLIVAEQGR EWGWMSGSVL GLILLGIVGI AAFIAIEIKM KDEALIPMRL FRSRVFSTGL GANVLIGLGM FGALSTLPLY LQLVKGATPT ESGLLLIPMM VGIMGGSVLS GQLTMRTGRY KIFPVMGTAL LTASFFLMLT VDVDTGYPLL DLYFVMIGLG LGLCMQTLLI AVQNTVPAKD MGVATSSATF FRQLGGTLGV AVFLSLLFNS LPDKIQGAFQ SAAGNPAFLS AVQTAAQDPN SPGHATALAL VQAQTNPAAA ASVTDAFNSD SSFLSTLDAN IARPFQEGYV ASTQLVYIIG GIIMAVAFVL VLTMKELPLR TQSAIDERLA EQAAEAKDAE ALSFEGAFSA VDAGDASTAA TTRPTTESTS PSSSGGGRHQ GGRHSAADED LVPAWEIAGD TVSPGAGRHR A
|
| |