| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0720 |
|---|
| Symbol | |
|---|
| ID | 8446307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 789433 |
|---|
| End bp | 790287 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645039855 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_003200123 |
|---|
| Protein GI | 258650967 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAC CTGGCAGCGT GGTCAACAGC GCGCTCAGGA CGGACCCGGA ACCGGTGGCC
GGCGGGTCGG CCGTGCCGTC CGGACCGTCG GCACGAAAGG CCCCGTCCGG GCGACGGGCC
AAGGCCCCGG CCACCCCGCT GGCGCGTACC CGCCGGGCCC GGCAACTGGC CGGCCAGCTC
GCGCTGGGCT ATCCGGACGC CCACTGCGAA CTGGACTTCA CCACCCCGCT GGAACTGGCC
GTCGCCACCA TCCTGTCCGC CCAGTCCACC GACGCCCGGG TCAACCTGGT CACGCCGGCC
CTGTTCGCCC GCTACCGCAG CGCGGCCGAC TACGCGTCGG CGTCCCGGTC CGAGCTGGAG
GAGCTGATCA AGTCCACCGG CTTCTTCCGG AACAAGACCT CCTCGTTGAT CGGTCTGGGT
CAGGCCCTGG TCGAGCGGTT CGACGGCGAA CTGCCCTCCA CGCTGGCCGA CCTGGTCACA
CTGCCCGGTT TCGGCCGCAA GACCGCGAAC GTGGTGCTGG GCCACGCCTT CGGCGTTCCC
GGCATCACCG TGGACACCCA CATGGCCCGG CTGGTCACCC GCTGGGGGCT GACCACCCAG
ACCGACCCGG TCAAGATCGA GGCCGAGCTG AACGAGCAGC TGCCCCGGGC CCAGTGGACC
GCGTTCTCCG ATCGCACGAT CTTCCACGGC CGACGGGTGT GCCACGCCAA GAAGCCGGCC
TGCGGGGCCT GCTTCCTGGC GCCGCTGTGC CCGGCCTACG GGGCGGGGGC AGGCGTGGTC
GAGCCGGAGG CGGCCGCCGC GTTGGTGGTC GGGGCCGAGC GTCCGCATCT ATTGGCGATG
GTCGGTCTGG CGTGA
|
|---|
| Protein sequence | MWQPGSVVNS ALRTDPEPVA GGSAVPSGPS ARKAPSGRRA KAPATPLART RRARQLAGQL
ALGYPDAHCE LDFTTPLELA VATILSAQST DARVNLVTPA LFARYRSAAD YASASRSELE
ELIKSTGFFR NKTSSLIGLG QALVERFDGE LPSTLADLVT LPGFGRKTAN VVLGHAFGVP
GITVDTHMAR LVTRWGLTTQ TDPVKIEAEL NEQLPRAQWT AFSDRTIFHG RRVCHAKKPA
CGACFLAPLC PAYGAGAGVV EPEAAAALVV GAERPHLLAM VGLA
|
|---|
| |