Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0671 |
Symbol | |
ID | 8446257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 739378 |
End bp | 740340 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645039806 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_003200075 |
Protein GI | 258650919 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGT GCGCCACGGC GAGCCAGCAG GCCGACCCGC CGAGCACGAG TTTCACGCCG ACCAGCAGCG CCGCCTCCTC GGCCAGCCCC ATCACCGTGC CCGGGCTGAG CACCTCGGTC AGCGAATCTC CCACCCCGAG CCCGACCCCC GAGCCGAGCA CCTCGACGCC GGAGCCGGCA CCCGAGACGA CCTCGGTGGT GGACGCCCCC GACGACGACT ACACCCCGCC GGTGGAGCAG CCCACCCCGT TGGAGCCGGT GCAGACGCAG GACCCGGCGA CCCAGGCCCC GGCGCCCGCT CCCTCCGGCG GCGGCCGGGT GGTGGTCATC GACCCCGGCC ACAACGGGGC CAACGGGGCC AACCCGGACG TGATCAACGC CCTGGTGGAC GCCGGCTTCG GCGAGACCAA GCCCTGCAAC ACCACCGGTA CCTCGACCAA CGACGGCTAC ACCGAGCACC AGTTCAACTG GGGGGTGGCC ACCAAGCTGC AGGCGATCCT GCAGGCCCGC GGGTATGACG TGCGGATGAC CCGCACCAGC GACGACGGCG TCGGCCCGTG CGTGAACAAG CGGGCCGCGT TCGGCAATGA CGCCAACGCC GACGCGGTGA TCTCCATCCA CGGCGACGGC GACGACGCCA GCGCCCGCGG CTTCTACGTG ATGACCGCCG AACGGGCCCC GGCCGGGGCG GCGATGGCCG CCCAGTCCGA GTCGCTGGCC AGCACCGTGC GCGACGCGCT GGTCAACGAC GGACTGTCCC CGTCCAACCA CCTGGGCTCG GGCGGGCTGT GGAAGCGCAG CGACCTGGCC GGCCTGAACC TGTCCACCCG GCCCACCGTC ATGATCGAGA TGGGCAACAT GCGCAACTCC GCCGACGCCG CCCTGATGAG CTCGTCCGCG GGCCAGCAGC AGTACGCCCA GGGCATCGCC GACGGCGTCA GCGCCTACCT CGGCGCCGGC TGA
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Protein sequence | MSACATASQQ ADPPSTSFTP TSSAASSASP ITVPGLSTSV SESPTPSPTP EPSTSTPEPA PETTSVVDAP DDDYTPPVEQ PTPLEPVQTQ DPATQAPAPA PSGGGRVVVI DPGHNGANGA NPDVINALVD AGFGETKPCN TTGTSTNDGY TEHQFNWGVA TKLQAILQAR GYDVRMTRTS DDGVGPCVNK RAAFGNDANA DAVISIHGDG DDASARGFYV MTAERAPAGA AMAAQSESLA STVRDALVND GLSPSNHLGS GGLWKRSDLA GLNLSTRPTV MIEMGNMRNS ADAALMSSSA GQQQYAQGIA DGVSAYLGAG
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