Gene Namu_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0659 
Symbol 
ID8446245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp727193 
End bp728203 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID645039794 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003200063 
Protein GI258650907 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGT ACACGGTTCG CCGTCTGCTT CAACTCGTGC TCGTGCTGTT CGTGCTGTCC 
ATCCTGCTGT TCTTCTGGTT GCGCAGCCTG CCCGGCGGCC CGGTCTCGGC GCTGCTGGGC
GACCGGGCCA CCCCGGAGAA GCGGGCCGAG CTGGAGAAGG TCCTGGGCCT GGACCAGCCG
GTCATCGTGC AGTACTTCAA GTACCTGGGC CGGGTGCTGA CCGGCGATTT CGGCCAGTCC
ACCGGGGTCT CGCCCGGCAC CGACGTGATG GACGTGTTCT TCACCCGGTT CGGCGCCACC
GTCGAGCTGG CCGTCGGGGC GATCGTGCTG GCCCTGTTGT TCGGCATCCC GCTCGGCTAC
TTCGCGGCCC GGCGCAAGGG CGGCTTCCTG GACACCGGGC TGATCGTCAC CTCGCTGATC
GGGATCGCCG TCCCGGTGTT CTTCCTGGCC TTCCTGCTCA AGTTCGTCTT CGCGGTCCAG
CTCGGGGTGC TGCCGCCGTC CGGCCGGCAG ACCGTCGGCA TCGGGGCCAC CCGGGTCACC
GGCCTGTTCA TCCTGGACGG GGTGCTCACC CGGGAATGGG ACGCGTCCTG GGATGCGATG
AAACACCTGA TCCTGCCGTG GATCGCGCTG GCCACCATCC CGTTCGCGGT CATCTTCCGG
ATCACCCGGG CCTCGGTGCT GGAGGTCCAG GGCGAGGACT TCGTCCGCAC GGCCGAGGCC
AAGGGGCTGA CCAACAGCAC CATCCGCAGC CGGCACGTGC TGCGCAACGC GATGCTGCCG
GTGATCACGG TGACCGGGTT GCAGACCGGG GCGCTGCTGG TCGGCGCCGT GCTCACCGAG
AAAGTCTTCG CCTACCCGGG TCTGGGTGAG GCGCTGGCCA TCGGCTTCAC CAAGAAGGAC
TACCCGGTGA TGCAAGTGGT CATCATCGCC GCGGCCGCGG TGTTCGTCAT CATCAACACC
CTGGTCGACC TGGCCTACGC CGTGGTCGAC CCGAGAATCC GGACCCGCTG A
 
Protein sequence
MLRYTVRRLL QLVLVLFVLS ILLFFWLRSL PGGPVSALLG DRATPEKRAE LEKVLGLDQP 
VIVQYFKYLG RVLTGDFGQS TGVSPGTDVM DVFFTRFGAT VELAVGAIVL ALLFGIPLGY
FAARRKGGFL DTGLIVTSLI GIAVPVFFLA FLLKFVFAVQ LGVLPPSGRQ TVGIGATRVT
GLFILDGVLT REWDASWDAM KHLILPWIAL ATIPFAVIFR ITRASVLEVQ GEDFVRTAEA
KGLTNSTIRS RHVLRNAMLP VITVTGLQTG ALLVGAVLTE KVFAYPGLGE ALAIGFTKKD
YPVMQVVIIA AAAVFVIINT LVDLAYAVVD PRIRTR