| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0554 |
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| Symbol | |
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| ID | 8446138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 614948 |
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| End bp | 615847 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645039688 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003199959 |
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| Protein GI | 258650803 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAAAG CCCCCCTGCC GGTCCGGGAC GGGCTCAATC CCAGCCGGAT CCGGCTGCCC
GACGAGGGCT CGGGCACGGT GGTCGAGTAC CTGCTGGAGC GGTTCGCCGC GGACGCCACC
CGGGTCCGGG AGAAGGTCGA CGCCGGTGAG GTGGTCGACG GCGAGGGCCG GGTGGTCGAC
CCATCGACGC CGCTGACGTC GTCCCAGTGG GTCTTTCTGT ACCGCGACCC GGCGCCCGAA
CCGCGGGTGC CGTTCGAGAT CGAGATCCTC CACCGGGACA GCGATCTGCT CGTCGTGGAC
AAGCCGCACT TCCTGGCCAC CATGCCCCGC GGGCTGCACA TCGTGGAGTC CGCCCTGGTT
CGGTTGCGGC GCGAGCTGGA CCTGCCCGAG CTCAGCCCGA TCCACCGGCT GGACCGGGTG
ACCGCCGGCG TGCTGGTGTT CTCGCTGCGA CCGGCCAACC GCGGCGCGTA CCAGACCCTG
TTCGCCCAGC GGAAGGTCAC CAAGTACTAC GAGGCGGTCG CCGGCCACCG GGCCGACCTG
ACGCTGCCCA CCACCGTCGA GTCGCGGATC GTCAAGTTTC GGGGAACGCC CACCGCGCAA
CAGGTTCCGG GGGAGCCGAA TGCCCGCACG GTGGTCGAAC GGCTTGCTGC CCGCGGCGAG
CGCGCCCTGT ACGGGTTGCA TCCGCACACC GGCAAGGTGC ATCAGCTGCG CCTGCACATG
ACGTCGTTGG GGGTGCCGAT CGTCGGCGAC AACTTCTACC CGACCCTGCT GGACACCCCG
CGTGACGACT ACTCCGACCC GCTGCAGCTG CTGGCCAGGT CGATCGAGTT CCCGGACCCG
TTCACCGGCC GGCGGCGCCG GTTTGAGAGC CGCCGCACCC TGGCCGCCTG GCCCGGCTGA
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| Protein sequence | MRKAPLPVRD GLNPSRIRLP DEGSGTVVEY LLERFAADAT RVREKVDAGE VVDGEGRVVD
PSTPLTSSQW VFLYRDPAPE PRVPFEIEIL HRDSDLLVVD KPHFLATMPR GLHIVESALV
RLRRELDLPE LSPIHRLDRV TAGVLVFSLR PANRGAYQTL FAQRKVTKYY EAVAGHRADL
TLPTTVESRI VKFRGTPTAQ QVPGEPNART VVERLAARGE RALYGLHPHT GKVHQLRLHM
TSLGVPIVGD NFYPTLLDTP RDDYSDPLQL LARSIEFPDP FTGRRRRFES RRTLAAWPG
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