Gene Namu_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0512 
Symbol 
ID8446095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp570538 
End bp571434 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID645039648 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003199920 
Protein GI258650764 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CCGATGAGAC CCCGCTCGCG CTCGAACCGG GCGGGGCGCC CACCCTGACC 
GCGAATCCCC GACGGCGTAG CCGTCGGCGG CGACGGCTGA TCGTCTATCT GTTGCTGGTG
ATCGGAGTGG TCGCCACCCT GATGCCGTTC GTCTGGATGC TGCTGGGCTC GGTCAAGACC
GACGGCGAGA TCCTGCGCGA TCCCTCGGGT TTCCTGCCCC AGGAGCCGAC GCTGAGCAAC
TACGCGACCT GGTTCACTGA CCTGAACATC AGCACGTTCT TCGTCAACAG CCTGATCGTC
GCGGTCGTCA CCGTGCTGGG CAACCTGTTG TTCTGCTCGA TGATCGGCTA CGCGCTGGCC
AAGATGGAGT TCGCCGGCAA ACGGCTGCTG TTCCTGCTGG CGATGCTCAC CCTGATGGTC
CCCGGCGTGG TGACCTTCGT GCCGCTGTTC GTGCTGGTCA GCAAGCTGGG CCTGCTCAAC
ACCTACCCGG CGTTGATCCT GCCGTTCCTG ACCTCGCCGC TCGGGGTCTT CCTGATGCGG
CAGTTCATGA TGGGGATCCC GGACTCGCTG ATCGAGGCCG CCCGGATCGA CGGGGCCGGC
GAGCTGCGGA TCTTCTTCCG CGTGGTGATC CCGTTGTGCG GGCCGCCGCT GGCCACGCTG
GGCATCCTGA CCTTCCTCGG TTCCTGGAAC AACTTCCTGT GGCCGCTGGT CGCCGCCCAG
AGCGAGCAGA TGTACACCCT GCCGGTGGCC CTGTCGCTGT ATTCCACCGG CGAGAACGCC
ACCAACTACG GCCTGCTGCA GGCCGGGTCC GTGCTGGTGA TCGGGCCCAT CGTGCTGCTG
TTCGTGCTGC TGCAACGGTT CTTCGTGCAG AGCGTGGCCA CCGCCGGCAT CAAGTGA
 
Protein sequence
MTISDETPLA LEPGGAPTLT ANPRRRSRRR RRLIVYLLLV IGVVATLMPF VWMLLGSVKT 
DGEILRDPSG FLPQEPTLSN YATWFTDLNI STFFVNSLIV AVVTVLGNLL FCSMIGYALA
KMEFAGKRLL FLLAMLTLMV PGVVTFVPLF VLVSKLGLLN TYPALILPFL TSPLGVFLMR
QFMMGIPDSL IEAARIDGAG ELRIFFRVVI PLCGPPLATL GILTFLGSWN NFLWPLVAAQ
SEQMYTLPVA LSLYSTGENA TNYGLLQAGS VLVIGPIVLL FVLLQRFFVQ SVATAGIK