Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0440 |
Symbol | |
ID | 8446021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 477990 |
End bp | 479168 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645039575 |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_003199849 |
Protein GI | 258650693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCGA CGGTTCGCAG GGTGCAGTTG ATCGCGCCGG CCACCGTCAC CCTGCTGGTG GCGATGGCCG CCGTCGTGAC CGTCGCAGCA GTTGCCCAAC CGAACCCATC TGTGGCCGTG CCGGGTGGGT CGGGGTGTGT GCCGGTGACG GGCAGCACCG GCGGCGTCCT GGCCGCGGCG CAGGAACGCA ACGCGAAGGT CGTCATCGGT GTCGCGTTGG CCCGTGGTTT GGGGTCGACG GGGGCGGCGA TCGGGGTGTC TGTCGCGCTG GCGGAGTCGA CGCTGTTCAA CTACGCCAAC GACGGCACCT CGACGCTGGT CGGGTCGGCG GAGGGCCGCC AGCTCACCGA CGCTGAGCGG GCGGTGGCCC GGCAATCGTT GGCGTTTCCG CATGATCGGG TCGGGAACAA CCTGGACTCG ATCGGGCTGT TTCAGCAGCG GCCGATGACC GGCTGGGGTA CTCCGGCGGA GTTGATCGAC CCGGCCATCG CGGCCGGGAA GTTCTATGAC CGGCTCGTCC AGGTCCCGGG GTGGCAGGGC ATGCCGCCGT GGAACGCGGC CCAGACGGTG CAGGGGTCGC CGTCTTCGGA CGGCGGCATC TACCGCGACA TGTACACCCA GGCCACCGGA ATCGTCGCCA ACCTCACCAC CGATACCGGC GGAACATCCG CGACCGTTGC ACCGGTCGCG GCGGCGGTGG GTCCGGGATG TGGGTCTGCG GAAGTCGCCC ATGTCGCGGT CACCGGCGGT GGTGGGTCGG CGGCGTGGGG CGGGTATCAG AACGGGCGGA TCCCGGCGGC GGCGTTGTGC CCGGTGCCGT CCGCCCCCGG ATTGTTGTTG GAGTGCCGGG CGGCGGCGGC GTTCGACGAG TTGAATGCGG CGTTCCGGGC GGTGTTCGGG CAGGACATCG GGATCACCGA CGGCTACCGC TCCTACCAGG AGCAGGTCGC CTGCCGGGCG GAGAAGGGCA GCCTGTGCGC CGATCCGGGC ACGAGCAACC ACGGGTGGGC CAAGGCGGTG GACATCGGCG CCTGCTGCGG CGTCAACACC GGCAGCGGGG CGGCGTTCGA CTGGCTCACC GCCAACGCGG GCGCGTTCGG CTGGGTCCAT CCGCCGTGGG CGCAACCCGG CGGGTCGAAA CCGGAACCGT GGCATTGGGA ATACGGGGCG ATCTCATGA
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Protein sequence | MISTVRRVQL IAPATVTLLV AMAAVVTVAA VAQPNPSVAV PGGSGCVPVT GSTGGVLAAA QERNAKVVIG VALARGLGST GAAIGVSVAL AESTLFNYAN DGTSTLVGSA EGRQLTDAER AVARQSLAFP HDRVGNNLDS IGLFQQRPMT GWGTPAELID PAIAAGKFYD RLVQVPGWQG MPPWNAAQTV QGSPSSDGGI YRDMYTQATG IVANLTTDTG GTSATVAPVA AAVGPGCGSA EVAHVAVTGG GGSAAWGGYQ NGRIPAAALC PVPSAPGLLL ECRAAAAFDE LNAAFRAVFG QDIGITDGYR SYQEQVACRA EKGSLCADPG TSNHGWAKAV DIGACCGVNT GSGAAFDWLT ANAGAFGWVH PPWAQPGGSK PEPWHWEYGA IS
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