Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0416 |
Symbol | |
ID | 8445997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 450572 |
End bp | 451228 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645039553 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_003199827 |
Protein GI | 258650671 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA CCCGAGACCA CGTGGCAGAC GACTCGGTGC CCCGCGACCC GACACCTGGC GACCGGCGGC GGCGCCAGAT CGGGATCCTG CTGTTCGACG GCGTCGAAGA GCTGGACGCC GTCGGCCCCT GGGAGGTGCT GTCCACCTGG ACCCAACAAC ACCCCGACGA CGGCTGGGAC GCCTTCTGCC TTTCCTCGGA CGGCCGCCCC GTCCGCAGCG CCAAGACCCT GGTCATCGGC GCGCACCACT CGATCGACGA CGCGCCGGTC ATGGACATCC TGGTTCACCC CGGTGGCCCG GGCACCAGAC CGATGCTGCG CAACCGTGGC CACCTCGACT GGGTCCGCCG GCAGCGCGCC ACGGTTCCCC TGATGACATC GGTCTGCACC GGCAGCCTGG TCTACGCGGC CGCCGGGTTG CTGGTGCGCC GCAGGGCGAC CACGCACTGG GCCTGGCTCA ACCTGCTCTC CGAGATGGAC CCGACGGTCA TCACCGACGT CAGCTCGCGA TTCGTCGACG ACGGCGACCT CATTACCAGC GCCGGGGTCA GCGCCGGCAT CGACATGGCG CTGCACCTGG TGGCCCGGCT CACCGACGTC GAACGTGCTC GGGAGATCCG CCGCGACATC CAGTACAACC CTCTGCCCCC CGTCTAG
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Protein sequence | MNDTRDHVAD DSVPRDPTPG DRRRRQIGIL LFDGVEELDA VGPWEVLSTW TQQHPDDGWD AFCLSSDGRP VRSAKTLVIG AHHSIDDAPV MDILVHPGGP GTRPMLRNRG HLDWVRRQRA TVPLMTSVCT GSLVYAAAGL LVRRRATTHW AWLNLLSEMD PTVITDVSSR FVDDGDLITS AGVSAGIDMA LHLVARLTDV ERAREIRRDI QYNPLPPV
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