Gene Namu_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0408 
Symbol 
ID8445989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp439641 
End bp440807 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID645039545 
Productsodium/hydrogen exchanger 
Protein accessionYP_003199819 
Protein GI258650663 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGTCA GCGCGGCGTT CCTGGTCGAG TTCGGCATCC TGTTGCTCAT CCTGGGTGCG 
GTCAGCGCTG TTGCCGGGAA GCTGGGTCTG TCCGCGGTGC CGTTGTTCCT GATCGCCGGA
CTATTCGTCG GCCCCGGCGG CCTGCTGCCG GTTCCTGCCG CGGCCCCGTT CCTGGAGGCG
GGGGCGGTGA TCGGCGTGGT GCTGCTCCTG CTGTCCCTCG GTTTGGAGTT CTCCGCGGAC
GAGTTCACTC AGGCGCTGCG GCGCCACACG CCCAGTGGCG TGGTCGATCT GGTGCTGAAC
GCGGTTCCCG GGGTGGTCGC CGGTCTGCTG CTCGGACTTC CTGTCGCCGG CGTGGTCGCG
CTCGGTGGGA TCACCTGGGT GTCCTCATCC GGCATCGTCT CGCGCACCCT GTCAGACCTG
GGTCGACTGG GCTACCGGGA AACGCCCGCG GTGCTCTCGG TTCTGGTCCT CGAGGATGTC
GCGATGGCGG TCTATCTGCC CATGCTGGGC ATCCTGCTGG CCGGCACCGC CTTCCTGGCC
GGACTGGCGG GAGTCCTGGT GGCGGTGGTC GCCCTGATCG GCGTGCTCAT GCTTTCCCGC
TGGTCGGGAC CCGTGATCGG GTGGCTGATC ACGCACGACT CGGACGAACA GGTGCTGCTG
CGGCTGCTCG CGTTGACCTT GCTGGTCGCC GGCGCGGCCG AGTACATGGG CATCTCTGCA
GCGGTCGGCG CGTTCCTGGT TGGCCTGGCC GTGCCGGCGG AGGCTGCCGA GTCCGTCCGC
CGGGTGATCG GCCCGCTCCG GGATCTGTTC GCCGCCGCAT TCTTCCTCTC CTTCGGCTAC
GCGATCGACC CGCGGGACAT GCCGCCGGCC CTGGTCGTGG CGGCCCTGCT CGCGGTGGTC
ACCGCGGTCA CCAAGGTGAT CACCGGTTGG TTCGCGGCCC GCCGCGACGG TGTCGGTGCC
CGTGGTCGGC GGCGGGCCGG GACGGCGCTG ATCGCGCGGG GTGAATTCTC GATGGTCATC
GCCGGTCTGG CGGTGGCCGC CGGCGTGACC GAGATCGGGC CGCTGGCCGC GACCTACGTG
TTGCTGCTCG CCGTCGGAGG TTCGCTGCTC ACCCGTCTGT CCGGACAGGG CAGGGACAGA
CTCGCGCATC CGCACCGCCA GGCTTGA
 
Protein sequence
MHVSAAFLVE FGILLLILGA VSAVAGKLGL SAVPLFLIAG LFVGPGGLLP VPAAAPFLEA 
GAVIGVVLLL LSLGLEFSAD EFTQALRRHT PSGVVDLVLN AVPGVVAGLL LGLPVAGVVA
LGGITWVSSS GIVSRTLSDL GRLGYRETPA VLSVLVLEDV AMAVYLPMLG ILLAGTAFLA
GLAGVLVAVV ALIGVLMLSR WSGPVIGWLI THDSDEQVLL RLLALTLLVA GAAEYMGISA
AVGAFLVGLA VPAEAAESVR RVIGPLRDLF AAAFFLSFGY AIDPRDMPPA LVVAALLAVV
TAVTKVITGW FAARRDGVGA RGRRRAGTAL IARGEFSMVI AGLAVAAGVT EIGPLAATYV
LLLAVGGSLL TRLSGQGRDR LAHPHRQA