Gene Namu_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0319 
Symbol 
ID8445900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp354198 
End bp354890 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID645039464 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003199738 
Protein GI258650582 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC GACCCTACAC CCTGCTCTCC TGCTGCACCT CGTTGGACGG TTACCTGGCC 
GGTGCGGGCC AGCGCCGCCT GCTGCTGTCC AACGACGCCG ACTTCGACCG GGTCGACGAG
GTGCGGGCCG GCTGCGACGC GATCCTGGTC GGCGCGGCCA CCGTGCGCAA GGACAACCCG
CGGCTGCTGG TCCGCACCGC CACCCGGCGC GACGACCGGG TCACCCGGGG CCAGGCCCCG
TCGCCGGCCA AGGTCACGCT GACCTGCGGG GCGCAGCTCG ATCCGACGGC CCGGTTCTTC
ACCGAGGGCG AGACCGACCG GTACGTCTAC TGCGCCAGTT CCGCCGTCAC CCAGGCCCGC
CGCAGCCTCG GCCCGCGGGC CACCGTGATC GACGGCGGCC AACCGGTCGA CCTGGCCTGG
ATGAGCCAGG ACCTGTACGG GCGGGGCATC CGCCGCCTGA TGGTCGAGGG CGGCGGGTCG
GTGCACACGC AGTTCCTCAC CGCCGGTCTG GCCGACGAGC TCAACCTGGT CATCGCGCCG
TTCTTCGTCG GCGACCACCG GGGCCGCCGG TTCGTCGACG ACGGAGACTT CCCCTTCCAT
CCGGGCCGCC GAGCCCGGCT GGCCGAGGTC CGGCAGATCG GGGACGTGGT GCTGCTGCGG
TACGCGCTGT CCGACCGGTT CGGCGCGCCA TGA
 
Protein sequence
MSERPYTLLS CCTSLDGYLA GAGQRRLLLS NDADFDRVDE VRAGCDAILV GAATVRKDNP 
RLLVRTATRR DDRVTRGQAP SPAKVTLTCG AQLDPTARFF TEGETDRYVY CASSAVTQAR
RSLGPRATVI DGGQPVDLAW MSQDLYGRGI RRLMVEGGGS VHTQFLTAGL ADELNLVIAP
FFVGDHRGRR FVDDGDFPFH PGRRARLAEV RQIGDVVLLR YALSDRFGAP