Gene Namu_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0278 
Symbol 
ID8445858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp309229 
End bp310449 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID645039422 
Productbeta-lactamase 
Protein accessionYP_003199697 
Protein GI258650541 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCAA CACGCAAGAG CCGCGGCCTG CTGGTCGTGG TCGCGGCCGG GGCTCTGGTG 
CTCGCGGGGT GCACCAGCGG CACCGAAGCC GCATCGACAA CGAAGTCTGC GGCCACGGTG
TCACCAACGG CGTCGGAAAC CGGTTCACCG GCGGACGATC TCGACCGGGC CCTGGCGGAA
CTGGTGGCCA TGCCGGGCGG GCCGCCCGGC GTCATCTCCA TCGTGCAGGT CGGCGACAAG
CAGACGGTGC ACACCGCCGG CGTCGCCGAC ACCACCACCG GGGCGGCGCC CGAGGCGACC
GATCACATGC GGATCGCCTC GGCAGCAAAG GCTTTCAGCG GCGCGGCCGC GCTGTCCCTG
GTCGACCAGG GGAAGCTCTC GCTGGACGAC ACGATCGGCA AGTGGCTGCC GGATCTGCCC
GCCGCCTGGG CCGACGTCAC CCTGCGCCAG TTGCTCAGCC ACACCAGCGG GTTGCCCGAC
TTCACCCAGA ACGCCGATTT CGGCGCCGCG GCCGGCGCCT CGCTGGATAC TCCGCTACCA
CCGGAGCAGT TGCTGACGTT CGTCTACGAC GAGCCGCTGG TGTTCCCGCC GGGCAGCCGG
TACATGTACG ACAACACCGA CAACATCGTC GTCGGGTTGA TGATCCAGGC GGCCACCGGA
AAAACCTACG CGGAGGTGCT GCAGGAGCAG GTCTTCGCGC CGCTCGGCCT GGACAGCACC
TCCCTGCCGG TGGGCACCGA GATGCCCGAA CCCACGCTGC ACGGCTACGA CCTGGATGAG
CAGGGCGCGC CGGAGGATGT CACCGAGCTG GTGGCCGCCG GCTGGGCGTG GGCGTCCGGG
GGGATCGTCT CCACCCCGGC GGACCTGAAT ACCTTCATCC GCGGCTACGT CGGCGGGAAG
CTCTTCGGGC CCGAGACCCA GGCCCGGCAA ACCGATCTGT TCATCCCCGG CGGTGAATCC
GGGCCGCCCG GGCCGGGCCA GAACTCCGCC AGCCTGGCCC TGTTCCGCTA CCAAACCCCC
TGCGGCACCG TCTACGGGCA CACCGGCAAC ACCCCCGGCT ACACCCAGTT CATGGTCGCC
AGCCCGGACG GCACCCGCTC GGCGACGATG TCCATGACGC TGGCCCGCAA TGCCGGCGGC
ACCCCGGAGG AACTGCAGGT ACTGGACGCC CTCCAGCGAG CCGAAGCCGC CGCGATCTGC
CTGGCGCTGG ACGGCTCGTA G
 
Protein sequence
MRATRKSRGL LVVVAAGALV LAGCTSGTEA ASTTKSAATV SPTASETGSP ADDLDRALAE 
LVAMPGGPPG VISIVQVGDK QTVHTAGVAD TTTGAAPEAT DHMRIASAAK AFSGAAALSL
VDQGKLSLDD TIGKWLPDLP AAWADVTLRQ LLSHTSGLPD FTQNADFGAA AGASLDTPLP
PEQLLTFVYD EPLVFPPGSR YMYDNTDNIV VGLMIQAATG KTYAEVLQEQ VFAPLGLDST
SLPVGTEMPE PTLHGYDLDE QGAPEDVTEL VAAGWAWASG GIVSTPADLN TFIRGYVGGK
LFGPETQARQ TDLFIPGGES GPPGPGQNSA SLALFRYQTP CGTVYGHTGN TPGYTQFMVA
SPDGTRSATM SMTLARNAGG TPEELQVLDA LQRAEAAAIC LALDGS