Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0278 |
Symbol | |
ID | 8445858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 309229 |
End bp | 310449 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645039422 |
Product | beta-lactamase |
Protein accession | YP_003199697 |
Protein GI | 258650541 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCAA CACGCAAGAG CCGCGGCCTG CTGGTCGTGG TCGCGGCCGG GGCTCTGGTG CTCGCGGGGT GCACCAGCGG CACCGAAGCC GCATCGACAA CGAAGTCTGC GGCCACGGTG TCACCAACGG CGTCGGAAAC CGGTTCACCG GCGGACGATC TCGACCGGGC CCTGGCGGAA CTGGTGGCCA TGCCGGGCGG GCCGCCCGGC GTCATCTCCA TCGTGCAGGT CGGCGACAAG CAGACGGTGC ACACCGCCGG CGTCGCCGAC ACCACCACCG GGGCGGCGCC CGAGGCGACC GATCACATGC GGATCGCCTC GGCAGCAAAG GCTTTCAGCG GCGCGGCCGC GCTGTCCCTG GTCGACCAGG GGAAGCTCTC GCTGGACGAC ACGATCGGCA AGTGGCTGCC GGATCTGCCC GCCGCCTGGG CCGACGTCAC CCTGCGCCAG TTGCTCAGCC ACACCAGCGG GTTGCCCGAC TTCACCCAGA ACGCCGATTT CGGCGCCGCG GCCGGCGCCT CGCTGGATAC TCCGCTACCA CCGGAGCAGT TGCTGACGTT CGTCTACGAC GAGCCGCTGG TGTTCCCGCC GGGCAGCCGG TACATGTACG ACAACACCGA CAACATCGTC GTCGGGTTGA TGATCCAGGC GGCCACCGGA AAAACCTACG CGGAGGTGCT GCAGGAGCAG GTCTTCGCGC CGCTCGGCCT GGACAGCACC TCCCTGCCGG TGGGCACCGA GATGCCCGAA CCCACGCTGC ACGGCTACGA CCTGGATGAG CAGGGCGCGC CGGAGGATGT CACCGAGCTG GTGGCCGCCG GCTGGGCGTG GGCGTCCGGG GGGATCGTCT CCACCCCGGC GGACCTGAAT ACCTTCATCC GCGGCTACGT CGGCGGGAAG CTCTTCGGGC CCGAGACCCA GGCCCGGCAA ACCGATCTGT TCATCCCCGG CGGTGAATCC GGGCCGCCCG GGCCGGGCCA GAACTCCGCC AGCCTGGCCC TGTTCCGCTA CCAAACCCCC TGCGGCACCG TCTACGGGCA CACCGGCAAC ACCCCCGGCT ACACCCAGTT CATGGTCGCC AGCCCGGACG GCACCCGCTC GGCGACGATG TCCATGACGC TGGCCCGCAA TGCCGGCGGC ACCCCGGAGG AACTGCAGGT ACTGGACGCC CTCCAGCGAG CCGAAGCCGC CGCGATCTGC CTGGCGCTGG ACGGCTCGTA G
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Protein sequence | MRATRKSRGL LVVVAAGALV LAGCTSGTEA ASTTKSAATV SPTASETGSP ADDLDRALAE LVAMPGGPPG VISIVQVGDK QTVHTAGVAD TTTGAAPEAT DHMRIASAAK AFSGAAALSL VDQGKLSLDD TIGKWLPDLP AAWADVTLRQ LLSHTSGLPD FTQNADFGAA AGASLDTPLP PEQLLTFVYD EPLVFPPGSR YMYDNTDNIV VGLMIQAATG KTYAEVLQEQ VFAPLGLDST SLPVGTEMPE PTLHGYDLDE QGAPEDVTEL VAAGWAWASG GIVSTPADLN TFIRGYVGGK LFGPETQARQ TDLFIPGGES GPPGPGQNSA SLALFRYQTP CGTVYGHTGN TPGYTQFMVA SPDGTRSATM SMTLARNAGG TPEELQVLDA LQRAEAAAIC LALDGS
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