Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0210 |
Symbol | |
ID | 8445790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 238680 |
End bp | 239564 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645039357 |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_003199632 |
Protein GI | 258650476 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAGC TCCCGGAGGT CACCGCGCTG GCCGCGTTCC TGACCGAGCA CGCCGGCGGG CAGCGCATCA CCGCGGTGAG CGTGGCCGCA CTCAACGTGC TCACCACCTA CGACCCGCCC GCGTCCGCCC TGGTCGGCCG GACCGTGACC GGGGCCGGCC GGCACGGCAA GTTCCTGGAC CTGGTCACCG CCCCGGGCCC GGACGCGTCG CCGGGGACCC CGGACGCGCT GCACCTGATC CTGCACCTGG CCCGGGCCGG GTGGCTGCGC TGGTCGGACG CCATCTCGCC GCGGCCGCCG AAGATGGGTG GGCCGATCGC CCTGCGGGTC GCCCTCAGCG GCGGCGGCGG GTTCGACGTG ACCGAGGCCG GCACCAAGAA GTCGGTGACG GCGGCGGTGG TGACCGACCC GCGAGCGGTC CCCGGGGTGG CCCGGCTCGG CCCGGACGCG CTGGACCTGG ACCGCGCGGC GCTCGCGCAG GTGCTGGCCA CCCAGACCGG CCGGATCAAG AACGTGCTCA CCGACCAGCG GGTGATCGCC GGCGTCGGCA ACGCTTACTC GGACGAGATC CTGCACACCG CGCGGCTCTC GCCGTTCGCG ACGGCGGCCA AGCTGTCCCC GGACGAGCTC GATCGGCTCT ACGACGCGCT GGCCACCGTG CTCACCGACG CCGTGCTGCG CTCGGTCGGC GGTCAGGCCG CCCGGCTCAA GGGGGAAAAG CGCACCGGGC TGCGGGTGCA TGCGCGCACC GGCCTGCCCT GCCCGGTCTG CGGGGACGTC GTCGCCGAGG TCTCGTTCGC CGACCGGTCC TTCCAGTACT GCCCGACGTG CCAGACCGGC GGCAAGAAGC TGGCCGACCG CCGGCTGTCC CGGCTGGTCA AGTAA
|
Protein sequence | MPELPEVTAL AAFLTEHAGG QRITAVSVAA LNVLTTYDPP ASALVGRTVT GAGRHGKFLD LVTAPGPDAS PGTPDALHLI LHLARAGWLR WSDAISPRPP KMGGPIALRV ALSGGGGFDV TEAGTKKSVT AAVVTDPRAV PGVARLGPDA LDLDRAALAQ VLATQTGRIK NVLTDQRVIA GVGNAYSDEI LHTARLSPFA TAAKLSPDEL DRLYDALATV LTDAVLRSVG GQAARLKGEK RTGLRVHART GLPCPVCGDV VAEVSFADRS FQYCPTCQTG GKKLADRRLS RLVK
|
| |