Gene Namu_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0185 
Symbol 
ID8445765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp207606 
End bp208553 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID645039332 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003199607 
Protein GI258650451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC TCGCGGCACA CGACGCCGAT TCGCCGAGGA CGCCCGCGCC GGCCCGGCAA 
CGGCGGGGCG GCTACTGGTG GTACCTGGTG CCCGGCGCGA TCGGCTTCGT CGCCGTCATT
CTCGGGCCGC TGGTCTACAA CGTGTACCTG TCGCTGACCA AGTGGTCCGG CGTCGGCAGC
CCGCGCTTCA TCGGGTTGAC CAACTACATC CGGCTGATGG GCGACAGCGT CTTTTGGACC
TCGTTCAAGA ACTCGGTCGC GATGATCATC GCGATGGTGG TGATCCCCAC CCTGATCGGG
CTGATCCTGG CCTCGGTGCT GTTCGACTAC CTCGGAAAGC GTTTCGGCGC GGCCAGTATC
AGCGTGCTGC GGGCGGTGTT CTACCTGCCG CAGGTGCTGC CGGTGGTGGT CGCCGGGATC
GTCTGGGGAT GGATCCTGCG GCCGGACGGC GCGTTCAACG CGATGCTGGA CGCGGTCGGC
CTGTCCGGGT TCACCCGGGA CTGGCTCGGC GACCCGAACA CCGCCCTGCC GATGGTCATG
CTGGTCATGG TCTGGGTGCA GATCGGCTAT CCCGTCGTCA TCTTCATGTC GGCGCTGGGC
CGGGTCGACC CGGAGATCTA CGAGGCGGCC GAGATCGACG GGGCCGGCTA CTGGGCCCGG
TTCACCGCGA TCACCCTGCC GCAGATCCGT CCGGAGACCT TCGTGGTCGC CCTGACCTGC
ACCATTGCCG CGCTCAAGGT GTTCGGCCCG ATCTACGCCC TGACCCGCGG CGGGCCGGAG
AACGCGACCA ACGTGCCGTC GTACTTCGCC TACTACACGT TCTTCAAGAA GCTCGACGTC
GGCTACGGCG CGGCCATCGC CACCGTGCTG ACGATCATCA TCGTGCTCGT CGCGGTCGGC
ATCATGCGCT GGCAGGCGCA CAGCGAGAAG AAGGAGTTGA GCGCATGA
 
Protein sequence
MTDLAAHDAD SPRTPAPARQ RRGGYWWYLV PGAIGFVAVI LGPLVYNVYL SLTKWSGVGS 
PRFIGLTNYI RLMGDSVFWT SFKNSVAMII AMVVIPTLIG LILASVLFDY LGKRFGAASI
SVLRAVFYLP QVLPVVVAGI VWGWILRPDG AFNAMLDAVG LSGFTRDWLG DPNTALPMVM
LVMVWVQIGY PVVIFMSALG RVDPEIYEAA EIDGAGYWAR FTAITLPQIR PETFVVALTC
TIAALKVFGP IYALTRGGPE NATNVPSYFA YYTFFKKLDV GYGAAIATVL TIIIVLVAVG
IMRWQAHSEK KELSA