| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0128 |
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| Symbol | |
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| ID | 8445708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 143350 |
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| End bp | 145845 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645039276 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_003199551 |
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| Protein GI | 258650395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAG ACAGCGCGAC GGTCGAGGTG GACGGTCACC GGATCGCGTT GACCCATCTG
CGCAAGGTGC TCTATCCGGC CAGCGGCACC ACCAAATCGG AGGTGATTGC CTACTTCGCC
GAGGTCGCGC ACGCGATGAT CCCGCACCTG GCCGACCGTC CGGTGACCCG CAAACGGTGG
CCCGACGGGG TCACCACCGC GCCGTTCTTC CACAAGGACC TGCCCAAGGG CACGCCGAGC
TGGGTGCCGC GGCGGACCAT CCGGCATTCC GACGGGCCCA AGGACTACCC GCTGGTCGAC
TCACCGGCCA CGCTGGCCTG GTTGGGACAG ATCGCCGCCC TGGAACTGCA TGTGCCGCAA
TGGACCTTTG GGTCCGCGGC GGCGTCGGTG GCCGGGGGTG ATGGTGAGAT CACCGAGGCC
GTCTTCGATG CCGTGCATCC GAACCGGTTG GTGTTCGACC TCGATCCGGG ACCGGGGGTC
GAGCTGGTCG ACTGCGCGCA CGTCGCCCGG GCCGTCCGCG AGCGGATGGG CGGCGCGGCG
CTGGTCCCGG TCACCAGTGG TTCCAAGGGG ATCCATCTCT ACGCCTGGCT GGACGGGTCG
CTGACCTCGG ACGACGCTTC GGCCTACGCG CGGGAGATCG CCGAGGCGAT CGAGCAGGAC
ATGCCGGATC TGGTGGTCTC CCGGATGGCC AAGTCGCTGC GCCGCGGGAA GGTGTTCATC
GACTGGTCGC AGAACAACGG CTCCAAGACC ACCATCGCGC CCTACTCGTT GCGCGGGCGG
GAGCACCCCA CCGTGGCGGC CCCACGGACC TGGGAGGAGC TGGCCGACCC CGAACTGCGG
CACCTGGAGT ACACCGAGGT GCTCGAACTG CTGGCCGCCG CGCCGGATCC CATGCAGGGC
CTGGAGGACG GCGACAACGA CGGCGCCGAG ACTCGCGGCG GCTCCCGGCG GCGGGGGCGC
GGGCCGGACA CCAAGCTGGA CACCTACCGA TCCATGCGGT CGGCCGACAA GACCCCGGAA
CCGGTGCCCG AGCCGGGCCT GCTGCCGCAG GGAGACGACG ACACGTTCGT CATCCAGGAG
CATCACGCGC GGCGACTGCA CTACGACTTC CGGCTCGAAC GCGACGGGGT GCTCGTCTCC
TGGGCCGTGC CGAAGGGGGT GCCGGAGAGC ACCGGTCGCA ATCATCTGGC CGTGCACACC
GAGGACCATC CGATGGACTA CGCCGACTTC GCCGGCGAGA TCCCGCACGG CGAGTACGGC
GGCGGCACGG TCAGCATCTG GGACCGCGGC ACCTATGCCA CCGAGAAATG GCGTGAGGAC
GAGGTCATCA TCGTGCTGCA CGGCGGCAAG GCCCGCGGCC GCTACGCGCT GATCCGCACC
GGTGGCAAGA ACTGGCTGAT GCACCGGATG AAGGACCAGA GCCCCCAGCC CAAGCAGTAC
GACGACCACC GTCCGGCCAC GCCCACCGCC CCGGTCACCG CCCGGCCGGC CCCGGCCCGG
TCGACCCGGC CCGAGCCGCC GAAGGATCTG CGGCCGATGC TTGCCACCGC CGGCTCGGTC
GAGGACGTGG CCGACGAGCG GCGCTGGCGG TTCGAGGGCA AGTGGGACGG TATCCGGGCC
ATCGCCACCG TCGGGCCGTC GGGATTGACC CTGCGCAGCC GGCTCGGCAA CGACGTCACC
CCCACCTATC CCGAGCTGGC CGTGCTGGCC GAGCTGCTCG ACGGGCACAG CGCGGTGCTC
GACGGTGAGA TCGTCGCCCT GCAGGACGGG CGGACCAGCT TCCACGAGAT GCAGAAGCGG
ATGAACGTGC AACGGGCCAG GGACGTGGCC CGGGTGATGC GCGACGTGCC GGTGCAGTTC
TGGATCTTCG ACGTGCTCAA CCTGGACGGC ATCTCCCTGC TGGACAAGCG CTATGACGAT
CGCCGCCGGA TCCTGGAGGC GCTGCCGTTG ACCGGCGGGG TCTGCCTGGT GCCGCCGCAG
CTGGCCGGTC CGGCGCGGGA TGCGCTGCGC GGCAGCGCCG ACCGGCAGTG GGAGGGCATC
GTCGCCAAGC TCGGCGATTC GACCTACCAG CCCGGCCGCC GCTCCCACTC CTGGCTCAAG
ATCAAGAACT TCCTCGACCT GGAGGTGGTG GTCGTCGGCT GGTCACCCGG CACCGGTCGC
CGGGAGGGGA CCGTGGGGGC GCTGCTCCTG GCCGTCCCGG ACGGCGCCGG AGGCCTGCGC
TACGCCGGCA AGGTGGGCAC CGGCTTCACC GATGCGATCC TGGACCAGCT GATGCAGGCG
CTCGCCCCGC TGCGCGCCGA CCGCTCGGCC GTCGCCGATA CCATCCCGAG AGCCGATGCG
GCCGGAGCGA TCTGGGTCCG CCCCGAACTC GTGGGCGAGG TCAAGTACGG CCAGTGGACC
CCCGAGCGCC GGTTGCGCGC CACCAGCTGG CGAGGCCTGC GGCCGGACAA GACGGTCGCC
GACCTCATTG CCGGCTCCGC CCCGCCCCCT TCCTGA
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| Protein sequence | MAADSATVEV DGHRIALTHL RKVLYPASGT TKSEVIAYFA EVAHAMIPHL ADRPVTRKRW
PDGVTTAPFF HKDLPKGTPS WVPRRTIRHS DGPKDYPLVD SPATLAWLGQ IAALELHVPQ
WTFGSAAASV AGGDGEITEA VFDAVHPNRL VFDLDPGPGV ELVDCAHVAR AVRERMGGAA
LVPVTSGSKG IHLYAWLDGS LTSDDASAYA REIAEAIEQD MPDLVVSRMA KSLRRGKVFI
DWSQNNGSKT TIAPYSLRGR EHPTVAAPRT WEELADPELR HLEYTEVLEL LAAAPDPMQG
LEDGDNDGAE TRGGSRRRGR GPDTKLDTYR SMRSADKTPE PVPEPGLLPQ GDDDTFVIQE
HHARRLHYDF RLERDGVLVS WAVPKGVPES TGRNHLAVHT EDHPMDYADF AGEIPHGEYG
GGTVSIWDRG TYATEKWRED EVIIVLHGGK ARGRYALIRT GGKNWLMHRM KDQSPQPKQY
DDHRPATPTA PVTARPAPAR STRPEPPKDL RPMLATAGSV EDVADERRWR FEGKWDGIRA
IATVGPSGLT LRSRLGNDVT PTYPELAVLA ELLDGHSAVL DGEIVALQDG RTSFHEMQKR
MNVQRARDVA RVMRDVPVQF WIFDVLNLDG ISLLDKRYDD RRRILEALPL TGGVCLVPPQ
LAGPARDALR GSADRQWEGI VAKLGDSTYQ PGRRSHSWLK IKNFLDLEVV VVGWSPGTGR
REGTVGALLL AVPDGAGGLR YAGKVGTGFT DAILDQLMQA LAPLRADRSA VADTIPRADA
AGAIWVRPEL VGEVKYGQWT PERRLRATSW RGLRPDKTVA DLIAGSAPPP S
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