Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0128 |
Symbol | |
ID | 8445708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 143350 |
End bp | 145845 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645039276 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_003199551 |
Protein GI | 258650395 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR02777] DNA ligase D, 3'-phosphoesterase domain [TIGR02778] DNA polymerase LigD, polymerase domain [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAG ACAGCGCGAC GGTCGAGGTG GACGGTCACC GGATCGCGTT GACCCATCTG CGCAAGGTGC TCTATCCGGC CAGCGGCACC ACCAAATCGG AGGTGATTGC CTACTTCGCC GAGGTCGCGC ACGCGATGAT CCCGCACCTG GCCGACCGTC CGGTGACCCG CAAACGGTGG CCCGACGGGG TCACCACCGC GCCGTTCTTC CACAAGGACC TGCCCAAGGG CACGCCGAGC TGGGTGCCGC GGCGGACCAT CCGGCATTCC GACGGGCCCA AGGACTACCC GCTGGTCGAC TCACCGGCCA CGCTGGCCTG GTTGGGACAG ATCGCCGCCC TGGAACTGCA TGTGCCGCAA TGGACCTTTG GGTCCGCGGC GGCGTCGGTG GCCGGGGGTG ATGGTGAGAT CACCGAGGCC GTCTTCGATG CCGTGCATCC GAACCGGTTG GTGTTCGACC TCGATCCGGG ACCGGGGGTC GAGCTGGTCG ACTGCGCGCA CGTCGCCCGG GCCGTCCGCG AGCGGATGGG CGGCGCGGCG CTGGTCCCGG TCACCAGTGG TTCCAAGGGG ATCCATCTCT ACGCCTGGCT GGACGGGTCG CTGACCTCGG ACGACGCTTC GGCCTACGCG CGGGAGATCG CCGAGGCGAT CGAGCAGGAC ATGCCGGATC TGGTGGTCTC CCGGATGGCC AAGTCGCTGC GCCGCGGGAA GGTGTTCATC GACTGGTCGC AGAACAACGG CTCCAAGACC ACCATCGCGC CCTACTCGTT GCGCGGGCGG GAGCACCCCA CCGTGGCGGC CCCACGGACC TGGGAGGAGC TGGCCGACCC CGAACTGCGG CACCTGGAGT ACACCGAGGT GCTCGAACTG CTGGCCGCCG CGCCGGATCC CATGCAGGGC CTGGAGGACG GCGACAACGA CGGCGCCGAG ACTCGCGGCG GCTCCCGGCG GCGGGGGCGC GGGCCGGACA CCAAGCTGGA CACCTACCGA TCCATGCGGT CGGCCGACAA GACCCCGGAA CCGGTGCCCG AGCCGGGCCT GCTGCCGCAG GGAGACGACG ACACGTTCGT CATCCAGGAG CATCACGCGC GGCGACTGCA CTACGACTTC CGGCTCGAAC GCGACGGGGT GCTCGTCTCC TGGGCCGTGC CGAAGGGGGT GCCGGAGAGC ACCGGTCGCA ATCATCTGGC CGTGCACACC GAGGACCATC CGATGGACTA CGCCGACTTC GCCGGCGAGA TCCCGCACGG CGAGTACGGC GGCGGCACGG TCAGCATCTG GGACCGCGGC ACCTATGCCA CCGAGAAATG GCGTGAGGAC GAGGTCATCA TCGTGCTGCA CGGCGGCAAG GCCCGCGGCC GCTACGCGCT GATCCGCACC GGTGGCAAGA ACTGGCTGAT GCACCGGATG AAGGACCAGA GCCCCCAGCC CAAGCAGTAC GACGACCACC GTCCGGCCAC GCCCACCGCC CCGGTCACCG CCCGGCCGGC CCCGGCCCGG TCGACCCGGC CCGAGCCGCC GAAGGATCTG CGGCCGATGC TTGCCACCGC CGGCTCGGTC GAGGACGTGG CCGACGAGCG GCGCTGGCGG TTCGAGGGCA AGTGGGACGG TATCCGGGCC ATCGCCACCG TCGGGCCGTC GGGATTGACC CTGCGCAGCC GGCTCGGCAA CGACGTCACC CCCACCTATC CCGAGCTGGC CGTGCTGGCC GAGCTGCTCG ACGGGCACAG CGCGGTGCTC GACGGTGAGA TCGTCGCCCT GCAGGACGGG CGGACCAGCT TCCACGAGAT GCAGAAGCGG ATGAACGTGC AACGGGCCAG GGACGTGGCC CGGGTGATGC GCGACGTGCC GGTGCAGTTC TGGATCTTCG ACGTGCTCAA CCTGGACGGC ATCTCCCTGC TGGACAAGCG CTATGACGAT CGCCGCCGGA TCCTGGAGGC GCTGCCGTTG ACCGGCGGGG TCTGCCTGGT GCCGCCGCAG CTGGCCGGTC CGGCGCGGGA TGCGCTGCGC GGCAGCGCCG ACCGGCAGTG GGAGGGCATC GTCGCCAAGC TCGGCGATTC GACCTACCAG CCCGGCCGCC GCTCCCACTC CTGGCTCAAG ATCAAGAACT TCCTCGACCT GGAGGTGGTG GTCGTCGGCT GGTCACCCGG CACCGGTCGC CGGGAGGGGA CCGTGGGGGC GCTGCTCCTG GCCGTCCCGG ACGGCGCCGG AGGCCTGCGC TACGCCGGCA AGGTGGGCAC CGGCTTCACC GATGCGATCC TGGACCAGCT GATGCAGGCG CTCGCCCCGC TGCGCGCCGA CCGCTCGGCC GTCGCCGATA CCATCCCGAG AGCCGATGCG GCCGGAGCGA TCTGGGTCCG CCCCGAACTC GTGGGCGAGG TCAAGTACGG CCAGTGGACC CCCGAGCGCC GGTTGCGCGC CACCAGCTGG CGAGGCCTGC GGCCGGACAA GACGGTCGCC GACCTCATTG CCGGCTCCGC CCCGCCCCCT TCCTGA
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Protein sequence | MAADSATVEV DGHRIALTHL RKVLYPASGT TKSEVIAYFA EVAHAMIPHL ADRPVTRKRW PDGVTTAPFF HKDLPKGTPS WVPRRTIRHS DGPKDYPLVD SPATLAWLGQ IAALELHVPQ WTFGSAAASV AGGDGEITEA VFDAVHPNRL VFDLDPGPGV ELVDCAHVAR AVRERMGGAA LVPVTSGSKG IHLYAWLDGS LTSDDASAYA REIAEAIEQD MPDLVVSRMA KSLRRGKVFI DWSQNNGSKT TIAPYSLRGR EHPTVAAPRT WEELADPELR HLEYTEVLEL LAAAPDPMQG LEDGDNDGAE TRGGSRRRGR GPDTKLDTYR SMRSADKTPE PVPEPGLLPQ GDDDTFVIQE HHARRLHYDF RLERDGVLVS WAVPKGVPES TGRNHLAVHT EDHPMDYADF AGEIPHGEYG GGTVSIWDRG TYATEKWRED EVIIVLHGGK ARGRYALIRT GGKNWLMHRM KDQSPQPKQY DDHRPATPTA PVTARPAPAR STRPEPPKDL RPMLATAGSV EDVADERRWR FEGKWDGIRA IATVGPSGLT LRSRLGNDVT PTYPELAVLA ELLDGHSAVL DGEIVALQDG RTSFHEMQKR MNVQRARDVA RVMRDVPVQF WIFDVLNLDG ISLLDKRYDD RRRILEALPL TGGVCLVPPQ LAGPARDALR GSADRQWEGI VAKLGDSTYQ PGRRSHSWLK IKNFLDLEVV VVGWSPGTGR REGTVGALLL AVPDGAGGLR YAGKVGTGFT DAILDQLMQA LAPLRADRSA VADTIPRADA AGAIWVRPEL VGEVKYGQWT PERRLRATSW RGLRPDKTVA DLIAGSAPPP S
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