Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0915 |
Symbol | lspA |
ID | 3932129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 812233 |
End bp | 812787 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637901069 |
Product | signal peptidase II |
Protein accession | YP_506779 |
Protein GI | 88608487 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000140419 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCTCGG GTTCTTTGTT TTCAAGGTGC GTTTTACAAA GTGTGGTTTG CGTGTTGCGA AGAAAGTTGT TCGAGGGATC CGTTTTCTTT CGGCGAGTTT TAGTGATTCT AGGTGCGTGT TGCGTGACCT CCTTGGACTT ATACACTAAG CGTCTATGTG CTTCAATGTT TGAGAATATC ACTGAGGTAA AGCTTTTGCC CATTCTTAAT TTCGTCAAGG TGCACAATAC TGGCATGAGT TTTGGGCTTT TCGCTGGGTA CCAGTTCTCG AACCTTTTTT TTCTTCTTAT CAATGTACCC GCAGTACTAG TTGTGCTGTT CCTTTCTTTT CGTGAAAAGA GATTGGTTGC TTGTGTTGCG TGGAGTTTTA TTCTTGGAGG GGCTGTTGCT AACGTGACTG ACAGAGTGCG TTTTGGTGCT GTGCGCGATT TTATTGACTT TCATTTTTTG GATCTCCATT GGCCGGTTTT TAATGTTGCT GATGCAGCGA TTTTTCTTGG TGTTGTGTTT GTACTTTTTC ATTCAACCAG TGAGAAAGTC GGTAGCATAA ATTAG
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Protein sequence | MSSGSLFSRC VLQSVVCVLR RKLFEGSVFF RRVLVILGAC CVTSLDLYTK RLCASMFENI TEVKLLPILN FVKVHNTGMS FGLFAGYQFS NLFFLLINVP AVLVVLFLSF REKRLVACVA WSFILGGAVA NVTDRVRFGA VRDFIDFHFL DLHWPVFNVA DAAIFLGVVF VLFHSTSEKV GSIN
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