| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0730 |
|---|
| Symbol | gltA |
|---|
| ID | 3932016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 651157 |
|---|
| End bp | 652353 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637900886 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_506606 |
|---|
| Protein GI | 88608282 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.554862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTG AAAAAGTAAA AGTGAATGTG GAGGAATTTT TAAAAAGCAC AGCTGGACCC
TTCGGTGTCT CTGCCTCTTT GGAACCAAAG GGATTCTTTT ATGATCCAGG GTATGCAAAA
ACTGCTCCAT GCAAATCTAG CATTACTTTC ATAGATGGTG AAAATGGGAT ACTTCTGCAC
AGGGGCTACC CAATAGAGGA ATTGGCACAA ACTTCTGACT TTTTGCAGGT CGGCTACCTT
CTCATTGACG GCAAACTTCC AGATTCCGCT GCTACGCGAG AGTTTGAAGA GAGGATAAAA
CACGTACCGC AGCTTCCTGA GTGTGTCTTG AAAAATATCC GTTCTTTCCC AACGAGTGCG
CACCCGATGG CAGTTTTAAT CTCTGCACTT GCTTCGCTCG CCTCAGTGTA CGGAGAAATG
GACTTTAATC AGAAGAAGTT ACTTTTAGTT GCCTATACGC CATGGCTCAT AGCGCATATA
TACCGACACA TCAATTCTCT GGAGTTCGTT GAACCTGACA TCAGGCTTCC TTATACCGAG
AATTTCCTGT ACATGATGTT TGGTGAGAAA AAGCCCAAAG ATGCGGAAAT CTTGGACAAA
ATCTTTATCT TGCATGCGGA CCATGGTCAA ACTGCTTCGA CCTCTGTTGC ACGGATGGTT
GTATCTTCAG GAGCAAGCCC GATTGCGGCA TGTTCTGCGG CTACAGCTAG TTTATGGGGA
CCACTGCACG GTGGCGCAAA TGAGCGAGTC CTGGAAATGT TGAGAGGTAT AGTTGAAAGC
GGTGAGAAGG TAGAAAACTT CATTGAGCGC GTTAAAAGAA AAGAAGAGAG ACTTATGGGT
TTTGGGCACA GGGTGTATAA AAACTATGAT CCTCGTGCAG CCATATTAAA GCAAAAGGCT
CATGATGTGC TAAAAGCCGA TTCACCTATT CTAAAAACTG CTGGCGAACT TGAAACAATC
ACAGCAAGGG AAGAGTACTT TCTGAGTCGC AAATTATATC CTAATGTCGA CTTCTATTCG
GGAATAGTGC TAGACGCACT GGGAATATCA TCTTGCATGT TCACACCGAT TTTCGCACTT
GCTAGAACAG TAGGTTGGGT TGCACAAATC ACAGAGTTCT TGAGTGACAG TGAACAAAAA
CTTTGCAGAC CTAGACAAAT TTACGTAGGC GAACCAAGAA GAAACGTACA CGGTTGA
|
|---|
| Protein sequence | MNSEKVKVNV EEFLKSTAGP FGVSASLEPK GFFYDPGYAK TAPCKSSITF IDGENGILLH
RGYPIEELAQ TSDFLQVGYL LIDGKLPDSA ATREFEERIK HVPQLPECVL KNIRSFPTSA
HPMAVLISAL ASLASVYGEM DFNQKKLLLV AYTPWLIAHI YRHINSLEFV EPDIRLPYTE
NFLYMMFGEK KPKDAEILDK IFILHADHGQ TASTSVARMV VSSGASPIAA CSAATASLWG
PLHGGANERV LEMLRGIVES GEKVENFIER VKRKEERLMG FGHRVYKNYD PRAAILKQKA
HDVLKADSPI LKTAGELETI TAREEYFLSR KLYPNVDFYS GIVLDALGIS SCMFTPIFAL
ARTVGWVAQI TEFLSDSEQK LCRPRQIYVG EPRRNVHG
|
|---|
| |