| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0621 |
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| Symbol | |
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| ID | 3931717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 542756 |
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| End bp | 543523 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637900777 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_506500 |
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| Protein GI | 88608267 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000345466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGAAGC TTGTTTTAAT ACTCATCTTT CTGTTGCCGG TCTTCGGTTT TAGCGAACAA
CTTGGACAAC CCTATGAATG GCAGCTTGGA TTTCAGCGAT CAGCTAGTCC TGTGATGGAC
TATATCAATG ACTTCCACAA TCTAATGCTG ATAATCATGA TTTGCATTGC CGCTGGGGTT
AATGCTCTTC TCCTATATAC TGTTATCCGG TTTAACAAGA AGAGGAATCC ATCTCCTTCT
GGGACATCGC ACAATACTTT GCTGGAAATT ATTTGGACAG TGATACCAGT GCTTATCGTG
GTAGGCATCT CTTTCCCTTC ATTAAAGGTG CTAAAATACG AGGAGCATGT TCCAGATGCA
GACATGACAG TCAAAGTTAT CGGGCATCAA TGGTATTGGA CGTACAACTA CCCGGATCAT
GGTGAAATTA CCTTCGACAG CAATTTAAAG CACGACTTGG ATGAGGGCGA ACCTCGATTG
CTGGCTGTAG ACAATAATCT CGTCTTACCT GTTGATACGA CAGTAAGAAT TCAAATTACT
TCCGATGATG TAATACATAG CTGGGCGGTG CCGTCGCTTG GAATAAAAAA GGATGCGATC
CCAGGTAGAC TAAATGAAAC CTGGGTTCGT ATTGACAAGG AAGGCACTTA CTACGGACAG
TGCTCTGAGC TTTGTGGTAT ACTGCACGGG TTTATGCCTA TAGCTGTGAC TGCCGTAAGT
AAAGAAGCAT TTAAAGAATG GGTTACTCAA GCGAAAGACA GTTTTTAG
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| Protein sequence | MRKLVLILIF LLPVFGFSEQ LGQPYEWQLG FQRSASPVMD YINDFHNLML IIMICIAAGV
NALLLYTVIR FNKKRNPSPS GTSHNTLLEI IWTVIPVLIV VGISFPSLKV LKYEEHVPDA
DMTVKVIGHQ WYWTYNYPDH GEITFDSNLK HDLDEGEPRL LAVDNNLVLP VDTTVRIQIT
SDDVIHSWAV PSLGIKKDAI PGRLNETWVR IDKEGTYYGQ CSELCGILHG FMPIAVTAVS
KEAFKEWVTQ AKDSF
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