Gene NSE_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0468 
SymboltrmU 
ID3931376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand- 
Start bp385977 
End bp387092 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content41% 
IMG OID637900624 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_506353 
Protein GI88608438 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTGA TGCAAGAACT TGCAGAAATC ATCCCAGGAA AAGCATATAA TGACGTAAAG 
GTAATGGTTG CTATGTCAGG TGGTGTAGAT AGTTCAACCG TTGCAGCTTA TCTGCACAGA 
GTCGGCTACA AGGTCATAGG GGTAACATTA CAACTTCATA ATAATTTCAC TTCCACGCAA 
ACAAACAGAA AAACTTGCTG TGCAGGTTCG GACATATTTG ACGCAAAACG TGTGGCAGCC 
CAATTCGGCT TTTTACACTA CGTGGTAAAT ATGGAGGAAA CTTTCAGAAA AGAAGTGATA 
GAAAACTTCG CAGAGTCATA TCTCAAAGGT GAAACCCCGG TACCATGTGT AAAGTGTAAC 
CAAACAGTAA AGTTTAGGGA TCTCATGAAA ATTGCTAAAA GCCTATCCGT CGATGCACTT 
GCAACCGGTC ACTATGTAAG ACGATTAACC ACAACAAACG GTGTAGAGCT CCATAAAGGC 
ATCGATCCTT CAAAAGATCA AAGCTATTTT CTCTTCAATA CTACACGTGA ACAACTAGAA 
TTTCTCCGTT TCCCATTGGG AAATCTTAAA AAAAGCGAAA CAAGAGACTT AGCTAGGAAA 
CTAAGTGTGG ATATCTCGGA AAAACCAGAA AGCCAGGACA TTTGTTTTGT AAATGGAAAA 
TCTTATGCGG ATGTAATAAA GAAGTTTAGA CCGGATGCAC AGAGACCAGG AAAAATACTC 
TCAACAGATG GAGAAGTCCT TGGCACACAC AATGGTACAA TTCATTATAC CATTGGACAA 
AGACACGGAT TACAATTATC AGCCCCTATC CCACTATACG TGGTAAAAAT TGACGCTCAG 
AACAACATCA TAATTGTTGG CACACGTGAT AAATTGCAAC AACGTTCACT TTACGTGAAA 
GAAGTAAACT GGCTTGATAG AAAAGAATTG ACCGCTGGAC TAGAATGCGA GGTAAAGTTG 
CGTTCTGGCG CTGATACGGT AAAAGGATAT CTTTATCCAA ATGGTGAGCT CCTAAAGGTC 
TCCTTAGCTG AGGAACCCAA ATGTGCTATA GCTCCTGGAC AAGCTTGTGT TATGTATCAT 
GGAAGTAAAG TATTAGGCGG TGGATGGATC GTATGA
 
Protein sequence
MKLMQELAEI IPGKAYNDVK VMVAMSGGVD SSTVAAYLHR VGYKVIGVTL QLHNNFTSTQ 
TNRKTCCAGS DIFDAKRVAA QFGFLHYVVN MEETFRKEVI ENFAESYLKG ETPVPCVKCN 
QTVKFRDLMK IAKSLSVDAL ATGHYVRRLT TTNGVELHKG IDPSKDQSYF LFNTTREQLE 
FLRFPLGNLK KSETRDLARK LSVDISEKPE SQDICFVNGK SYADVIKKFR PDAQRPGKIL 
STDGEVLGTH NGTIHYTIGQ RHGLQLSAPI PLYVVKIDAQ NNIIIVGTRD KLQQRSLYVK 
EVNWLDRKEL TAGLECEVKL RSGADTVKGY LYPNGELLKV SLAEEPKCAI APGQACVMYH 
GSKVLGGGWI V