| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0454 |
|---|
| Symbol | hemF |
|---|
| ID | 3931670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 370372 |
|---|
| End bp | 371292 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900610 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_506339 |
|---|
| Protein GI | 88608200 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCTC GAATTCTTTT GGGTTTGGGG GAACCAATGT ATCATTACTG TTTGGGCAAT
ATTCATAATT GTGAGGTCCG TGTGTTAAGT GAGAAAAAAG AAACAGCAGC TGCCTGGTTT
AGGGAGTTAA GAGATTGTAT CAGGGATGAG TTTGTCGCTA TAGAAAAAGA GTTTGATCAC
AATTTTCGGT CGGGTTTTGC AGTAGAATCT TGGGAACGAG AAGGTGGCGG AGGCGGTGAA
ATGAGCCTCA TGTACGGTAC TGTATTTGAG AAGATAGGTG TGAATATATC AACCGTGCAT
GGAGTTTTCA GCGAAGATTT TGCATCTAAA ATTCCTGGTG CACTAGAAAG TGGGGGGAAT
TTCTGGGCTA GTGGTATTTC ATTGGTGGCG CATATGAGTT CTCCACTTGT TCCTGCAGTG
CATATGAATA CACGCATGAT AGTTACTGAT AAATACTGGT TTGGTGGTGG TGCAGATTTG
ACTCCTATGT ACTACAACGA GGAGGATGCA AAAACCTTCC ACGCTGAGTT TAAAGAAACG
TGTGATAGAC ATGATAGCAA GTATTACAAC GAATTCAGTA AGTGGGCGGA TGAATATTTT
TACGTAAAAC ATAGGAATGA ACCTAGGGGA ATAGGGGGAA TATTCTACGA TTACTTAAGA
ACAGATGATT GGGAGAAGGA TTTTGCTTTC ACAAAAGATG TTGGTAAGTG CTTTCTTTCT
GTATATCCAA AGATAGTGAG GAGAAATATG CATCTTTCTT ATACAAATGA GCAAAGGCAG
TTTCAGCTTC TCAAGAGGGG CAGGTATGTT GAATTTAATC TTCTGTATGA TAGAGGTACC
GAGTTCGGGC TCAAGACTGG TGGTAACGTG AAGGCAATCC TGATGTCTTT GCCCCCTGTG
GTGGAGTGGA GAGATTTTTA A
|
|---|
| Protein sequence | MYSRILLGLG EPMYHYCLGN IHNCEVRVLS EKKETAAAWF RELRDCIRDE FVAIEKEFDH
NFRSGFAVES WEREGGGGGE MSLMYGTVFE KIGVNISTVH GVFSEDFASK IPGALESGGN
FWASGISLVA HMSSPLVPAV HMNTRMIVTD KYWFGGGADL TPMYYNEEDA KTFHAEFKET
CDRHDSKYYN EFSKWADEYF YVKHRNEPRG IGGIFYDYLR TDDWEKDFAF TKDVGKCFLS
VYPKIVRRNM HLSYTNEQRQ FQLLKRGRYV EFNLLYDRGT EFGLKTGGNV KAILMSLPPV
VEWRDF
|
|---|
| |