Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0409 |
Symbol | sppA |
ID | 3931385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 333406 |
End bp | 334332 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637900565 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_506296 |
Protein GI | 88608447 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.927346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTT TGGGTGATGC GTTTGTCGAA AATTTTAGCT TAAGGAAGAG GTTAACTTTT TGGAAAGTGG TCACATTTGC TCTGATTGCT CTCCTCTTGA TTGTTTCGGG TTCTTCTTTT CGTGGTGGCT TTTTCGACAG TTTTTCCACC CCGTACATAG GTAGGGTGGT CTTTTCTGGG GTTATAGATC AAGATCTTGC AAGAAATAGC CAGTTTGCTT CTTTTGCGGA CAATCCTAAA ATAAAAGCAA TAATCCTTCA CGTAGACAGC GGAGGTGGGG GAGCGGCCGC TTCTGAAGCG CTTTACAACG TTGTTAGGAG CGTGTCTCAA GTTAAGCCGG TTGTGATTGT AGCCAACGGA ATAATGGCTT CTGGTGCGTA CATGGTAGCA ATGGCTGCTG AACATATAGT CGCATACAAT ACTAGTATTG TCGGTTCGAT TGGTATGATA TTACAAGCCC CGAATTTTTA TGAGATCGGA AAGAAAGTTG GGGTAAAAAT GGACGTTGTT CGTTCTGGTA GATTGAAAGC CTTCCCATCT ATTTTGGAAG AATTTACCAA AGAGGCGCGT TTGGCTATGG AGCACTCCAT CAGCGTCGCT AACGAGCACT TTTTATCTAT GGTACAGGAG CGCAGAAAGA TTACAGATGC CCGTGTGATG TCCGAGATTG CGACAGGTAA GATCTTTACC GGCAGGGAAG CGCTTGAGTT TTCCCTGGTT GACGAGATAG GTGATGAGGG AAATGCGGTA AGGTGGCTGA AGGAAAGGGG AATTACGGGA AAAATACGTG ATCTTGGTTT TGTTTCAGGT AAGGGTTTTC GTGTAGGTAA GATTCCCCCA TCTTCTTATC TTTCCATTTT AAATGAGTTT TTCCATTACT TGTGTTCTCC AGGGCTTCTT GCCGTTTTTC CGGGTATCTC TACTTAG
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Protein sequence | MDFLGDAFVE NFSLRKRLTF WKVVTFALIA LLLIVSGSSF RGGFFDSFST PYIGRVVFSG VIDQDLARNS QFASFADNPK IKAIILHVDS GGGGAAASEA LYNVVRSVSQ VKPVVIVANG IMASGAYMVA MAAEHIVAYN TSIVGSIGMI LQAPNFYEIG KKVGVKMDVV RSGRLKAFPS ILEEFTKEAR LAMEHSISVA NEHFLSMVQE RRKITDARVM SEIATGKIFT GREALEFSLV DEIGDEGNAV RWLKERGITG KIRDLGFVSG KGFRVGKIPP SSYLSILNEF FHYLCSPGLL AVFPGIST
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