| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0240 |
|---|
| Symbol | |
|---|
| ID | 3931557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 204135 |
|---|
| End bp | 205076 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637900396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_506134 |
|---|
| Protein GI | 88608664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0364801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTATGG CACAGATTTA TTTCCCAATA GCTGAAGTCG CAATACCCAT ATATGCAGTA
ATCGCTTTGG GTTTGATTTC AGGAATTATG GCCGGACTTT TTGGTATTGG CGGAAATATT
ATTATTATCC CTACCTTGAT TTTTATGGGT GTTGCACCAG CGGTAGCAGT TTCTAGCGCT
GTAAATCAAA CAATTGCATC TGGGTTTGCT AGCTTCCTCA ACCAGTTTAA ACAGGGAAAC
ACAGACTTAC CCATAGCTCT TTCTCTTTCT CTTGGTGGTC TGTTTGGGAT AACATTGGGA
TCATTTTTAT TGATGTATCT ACGTAATAAA GGAAACGTCG ATATTACAAT TTTTCTCGTA
TATGTTGTCA TGCTCAGTAT TACAGGGTGT GTCATGGCAT TTGACAGCAT TCGCAAATTG
TTATGTTTGT TTCGTAATGA AGTAGAGCCT CATGAACATA TGGAAAAGCC TTACAAAAAT
AAACTCATAA AATTGATTAA TAGACTTCCT CTTCGGTATC ACTTCCATAG TGCAAAGGGT
GATATAAGTC TAGTTGCTCT TGCTCTTTTT GGGACAGTTG TAGGTGTGAT TCTATCTATA
TCGGGGGTTG GCGGTGGGTT TATTCTTGTT CCTGTGCTCA TGTATGTTTT CAATCTTCCT
GTGCGCATTG CAATAGGAAC CTCAGTTGCT CAATCTGTCT TGGTTTCTGT TGCCACTGTT
TTTTTTCATG CAATCACACT GGGTACAGTG GATATGCTTT TGGGATTCTT ATTGAGTATT
GGTGCGATTT GTGGTGTCAC TTTTGGAGCA AAATTGAACT TAATTTTCCA CCCAGTGGTG
ATTAGATTAT TGCTTGCCCT TGTGATGTTC GGCGGTGTAC TCAGATTGCT GTTTACATTG
CTCGTGACAC CTGAGAGTCC GTATTCTTTT TCTGCTGTTT GA
|
|---|
| Protein sequence | MIMAQIYFPI AEVAIPIYAV IALGLISGIM AGLFGIGGNI IIIPTLIFMG VAPAVAVSSA
VNQTIASGFA SFLNQFKQGN TDLPIALSLS LGGLFGITLG SFLLMYLRNK GNVDITIFLV
YVVMLSITGC VMAFDSIRKL LCLFRNEVEP HEHMEKPYKN KLIKLINRLP LRYHFHSAKG
DISLVALALF GTVVGVILSI SGVGGGFILV PVLMYVFNLP VRIAIGTSVA QSVLVSVATV
FFHAITLGTV DMLLGFLLSI GAICGVTFGA KLNLIFHPVV IRLLLALVMF GGVLRLLFTL
LVTPESPYSF SAV
|
|---|
| |