Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0218 |
Symbol | glyA |
ID | 3932003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 183588 |
End bp | 184847 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637900374 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_506113 |
Protein GI | 88608618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0240245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGGGG GGGGAATAGT GTTTTTTAAA TCTAGGATTT CTGCGGTTGA TCCGGCTGTT GCTAGGATTA TTGATGGTGA AGTTAGTAGA CAGCGTAAAC ATCTGCAGTT GATTGCTTCC GAGAACTTTG CTAGTGCTGC AGTCCTGGAG GCGCAGGGGT CCGTGTTTAC AAATAAATAT GCGGAGGGTT ATCCAGGCAA GCGCTACTAT TGCGGATGTG AATATGCAGA TCAGATCGAG CGTCTTGCAA TAGAAAGGGT CTGTAAGTTA TTTGGGTGTT CTTATGCTAA TGTTCAGCCG CACTCTGGTT CCCAGGCAAA TCAGGCCGTA TTTTTAGCGC TCCTAAACCC TGGTGATACG GTTCTTGGTT TTTCTCTCGC GTCAGGGGGA CATCTTACTC ATGGTGCAAG TGTCAACCTT TCCGGAAAAT GGTTTAATGC GGTTCACTAC AACGTCAGAA GAGATAATTT CGAGATAGAC ATGGATGAGG TCCGTGATTT GGCAAAGAAG CATTCCCCAA GAATGATCAT TGCGGGCGCG TCAGCATACT CGAAGTATAT AGATTTTAAG AGCTTTCGTG AAATAGCAGA CGAGGTTGGT GCTTATTTAT TAGGTGATGT GGCACACTAC GCTGGTTTGA TAGCTGCAGG CGAGTATCCG TCTCCCTTCC CTTATGTAGA CGTTATGACC TCTACAACAC ATAAAACTTT GCGTGGTCCG CGTGGTGCAA TCGTTCTTAC AAATAGTGAA GAACTCATAA GGAAAATAAA TTCTGCTATA TTTCCAGGAT TGCAGGGTGG TCCTCAGATG CATGCAATAG CTGCTAGGGC TGTTGCTTTT GGTGAAGCTC TTACTACGGA GTTCAAAGAG TACATCAGGT CTGTCATAAG GAATGCAAAA ACTCTTGCAA ACGTTTTAAG AGAGAGAGGT TTTGATGTCC TCTCTGGCGG TACTGATACC CACATCGTTA TGATTGACTT GAGGAAGCTT AATCTGAAAG GTAATGTGAG CGCCTTAAAA CTTGAGAGTG CTGGGATAAT CTGCAACAAG AATGCTATTC CATTTGATGA GGAGAAGCCA TTTGTGACGT CTGGCTTACG ATTCGGTAGT CCCGCTGAAA CCACCCGTGG AATGCGCGAA TTGGAATTCG CGCACATCGG AGGGCTAATT GCTGACTTAC TTGAGGAAAA AATCAGCACA GATAATGCAG CTGAAATGGT CTTGGACCTC ACAAGCAAGT TCAACTTTTA CAACGTGTAA
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Protein sequence | MRGGGIVFFK SRISAVDPAV ARIIDGEVSR QRKHLQLIAS ENFASAAVLE AQGSVFTNKY AEGYPGKRYY CGCEYADQIE RLAIERVCKL FGCSYANVQP HSGSQANQAV FLALLNPGDT VLGFSLASGG HLTHGASVNL SGKWFNAVHY NVRRDNFEID MDEVRDLAKK HSPRMIIAGA SAYSKYIDFK SFREIADEVG AYLLGDVAHY AGLIAAGEYP SPFPYVDVMT STTHKTLRGP RGAIVLTNSE ELIRKINSAI FPGLQGGPQM HAIAARAVAF GEALTTEFKE YIRSVIRNAK TLANVLRERG FDVLSGGTDT HIVMIDLRKL NLKGNVSALK LESAGIICNK NAIPFDEEKP FVTSGLRFGS PAETTRGMRE LEFAHIGGLI ADLLEEKIST DNAAEMVLDL TSKFNFYNV
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