| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0165 |
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| Symbol | hflC |
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| ID | 3931780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 132657 |
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| End bp | 133517 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900321 |
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| Product | HflC protein |
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| Protein accession | YP_506062 |
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| Protein GI | 88608777 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00225021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGAG TTTTAGCAGT TGTTATAGGC TTTTTTTTGC TGTTGAATCT CAGCGTGTTT
GTGGTTCCCG AGGGGTATAA AGCTATAGTT TTACAGTTCG GTGAGGTGGT AACTGAAAAG
CCACTTGAAC CAGGTTTGCA TTTTAAGATC CCGTTCATCA ATAAAGTCAT AGTGATCGAT
ACTAGGATAC AGGACTTATC ATCCGATTCT AGGGAGGTCA TCGCCGCTGA TCAAAAGAGA
TTGATAGTTA GTTACTACGC GAAATATAAG ATTATAGATC CCGTACAATT TTATCGCTCT
ACTAGGAGTA TAGCTAATCT TGAGAGTAGG TTGGCTCCAG TGGTTGAGGC AAATATGAGA
GAACAGATAG GTCTGGTACC TCTTGTCAGT ATTCTGACTG AGGAGAGAGC AGATGTGATG
AACAAGATAA AATTGCATTC TGGAAATGTT GCGTCAGATT TTGGGGTCGC TGTAGTAGAT
GTTCGCATCA AAAGGACTGA CCTTCCGGAA GAAAATAGTG ATGCGATCTT TAAAAGGATG
CAAACAGAGC GAGAAAAAGA AGCACGTGAA ATAAGGGCAC GGGGTTACCA AGAAGCGCAG
AAAATAATCG CGAATGCTGA TAGGGAGAAG AAAGTCATTC TAACTGAAGC ATATGCAAAG
GCGCAATCGA TCAAAGGTGA AGGTGATGCT GAGGCTGCTA AACTATACGC GGAGGCGTAT
GCAGTTGATC AAGATTTCTA TAAGTTTTAC AGGACGATAA TTGCCTACAG GAAGGTTTTT
AGTCGGGGTA ATACAAAATT TATTATCAAC TCGAGTGATG AGTTTTTGGC TACATTGAAG
GATGTTAATG AGAAGAAATA G
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| Protein sequence | MRGVLAVVIG FFLLLNLSVF VVPEGYKAIV LQFGEVVTEK PLEPGLHFKI PFINKVIVID
TRIQDLSSDS REVIAADQKR LIVSYYAKYK IIDPVQFYRS TRSIANLESR LAPVVEANMR
EQIGLVPLVS ILTEERADVM NKIKLHSGNV ASDFGVAVVD VRIKRTDLPE ENSDAIFKRM
QTEREKEARE IRARGYQEAQ KIIANADREK KVILTEAYAK AQSIKGEGDA EAAKLYAEAY
AVDQDFYKFY RTIIAYRKVF SRGNTKFIIN SSDEFLATLK DVNEKK
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