Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0127 |
Symbol | tatC |
ID | 3931984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 104694 |
End bp | 105485 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637900283 |
Product | Sec-independent protein translocase TatC |
Protein accession | YP_506027 |
Protein GI | 88608113 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTTG ATAGTCACCT TTCTGAATTA AGGTACAGGA TGATAGTATC TATAATCTTT TTTCTTACTA CTTTCTGTTT CTGCTACTAT TTTTCCGAGG AGATATACAA GTTTTTGCTC AAGCCACTTG CTGAAGTGGC AAATCAACCG GAGCGTGTCG CTGGTTTAAA TAGTAGTTTC ACCCTCATTT ATACTGGTTT AACAGAAACA TTCGTCGTTT ATCTTAAGGT CGCTTTCTTG GGCGCACTTT TGGTCTCTTC TCCATTCTTC ATATGGCAGG TATACATGTT TATTGCACCT GGCTTATATC CCGGTGAGAA AAAGGCTTTT CTTCCTTATC TAATAGCAGC ACCGGTCCTT TTCATTCTCG GATGTGCGGT AGTGTACTAT TATGTATTTC CACTTGCTTG GAGGTTCTTT GTAAGTTTTG AGTACGATGG CAGTAAACCT GGGACTCTAC CAATAGAGTT CATGCCATCT GTTTCAGAAT ACCTCGACCT TGTTGTTCAA TTCATGTTTG CTTTCGGCAT AGCATTCCAG TTGCCTGCTA TACTCACTTT GCTATCTCAT ATGGGTTTGA TTGATCATAA TCTCTTGCTG AAAAAACGTA GGTTGTCGAT TGTATTAATA TTTATTGCTG CAGCTGTTCT TACGCCTCCA GACGTGCTTA GTCAGATAGG ATTGGCAATC CCAATGCTAT TTTTATATGA GCTTTCCATT TTTAGTTGTA GGTATGTCAG TAAAAAGAAG CTGATACTTA GGAAGGAAAG TAAAGAAAAT TCGGATGAAT AG
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Protein sequence | MAFDSHLSEL RYRMIVSIIF FLTTFCFCYY FSEEIYKFLL KPLAEVANQP ERVAGLNSSF TLIYTGLTET FVVYLKVAFL GALLVSSPFF IWQVYMFIAP GLYPGEKKAF LPYLIAAPVL FILGCAVVYY YVFPLAWRFF VSFEYDGSKP GTLPIEFMPS VSEYLDLVVQ FMFAFGIAFQ LPAILTLLSH MGLIDHNLLL KKRRLSIVLI FIAAAVLTPP DVLSQIGLAI PMLFLYELSI FSCRYVSKKK LILRKESKEN SDE
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