Gene NSE_0100 details

Gene Information

• Locus tag: NSE_0100
• Symbol: lipB
• ID: 3931621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 80625
• End bp: 81254
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637900256
• Product: lipoate-protein ligase B
• Protein accession: YP_506000
• Protein GI: 88608073
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATGGA AAATTGATAA AGACTGTGTT GATTACCAAA TGTCACTCAT GTTTATGCAA 
GAGCGGGTGA AGCAGGTTAT TAACGGTTCA GGCGATGAAT TGGTGTGGAT GTTGCAATAT 
GAGGCGCTCT ATACGGGTGG CACGAGTGCA GATCCACAGG ATCTACTCAA TTCAGATCTT 
TTCCCAGTTT TCAACGTGGG CAGAGGTGGT AAGTACACTT ATCATGGTCC TGGGCAACGT 
GTTATCTATC CAATACTTAA TCTAAGAAGC CGTAATATAT GTGATCTCCA TAAATATATT 
TATTTGTTGG AAGAAGTAGT AATTGTCACG CTCGATAATT TTGGGATTAA TGGCTGTAGA 
AAAGAGGGGC ATATTGGGGT CTGGGTTGGA ACGGGATGTC AGCCACCAAA AAAAATTGCG 
GCAATTGGTG TAAGAGTGAG TAAGTGGGTA AGTTATCATG GCATTGCTGT TAATTTGTAT 
CCAGATCTGA GCCACTATGA TGCGATAATT CCCTGCGGAA TTAAGAATTT TGGTGTAACT 
TCTGCAAAGG AAATGGGTAT AGAAATAAGG AGCTTTAATG CATTTGATAG ATACTTCAAA 
AAATCATTTG TGAAAATCTT TGGCGAATGA 

 

Protein sequence

MEWKIDKDCV DYQMSLMFMQ ERVKQVINGS GDELVWMLQY EALYTGGTSA DPQDLLNSDL 
FPVFNVGRGG KYTYHGPGQR VIYPILNLRS RNICDLHKYI YLLEEVVIVT LDNFGINGCR 
KEGHIGVWVG TGCQPPKKIA AIGVRVSKWV SYHGIAVNLY PDLSHYDAII PCGIKNFGVT 
SAKEMGIEIR SFNAFDRYFK KSFVKIFGE