Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0078 |
Symbol | |
ID | 3932242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 67388 |
End bp | 68098 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637900234 |
Product | hypothetical protein |
Protein accession | YP_505979 |
Protein GI | 88608450 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.391744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAACG GTTCAGAGAC TTCTCATTCC AGAAGCAACA CAGTAAGACG CGGAGCACGC AGGCTCGTCG CTGGAGTTGG ATTTTATGCT GCATATACAG GGCTCGTACT TCTTTGGGCA ATATTCGTAG TGGCGTATAC TGCTTTGCAA TTTCTCGATC AAAAAGACTG GAGCATCATA TGCGGAGGTG ACGGAGCGGT AGCACGTGGT ATGCTTGCTG CAGCTGCTCT GCTTGTGTGC TTGGCCACGC TTTTGTTTGC ATCTCAATCT AAAATGCACC CAGATCTTTG CCGTAAGAAG GTAGAATCCC TCTGTCAAAG CAAGCCGGAT CTGGAAGATG TATTGATAGA GGCAGACGGA GCTAGAACAG GGAATGGAGC TAAGGTTGTG CTTAGTGTCG CAACGGTACT GGCAGCCATT GCAGTAGTAC TATACCCGGC GATGTTTAAA TTCGCTGGAG TTAGTAATAA TAATCTTTAT TCTCGTGTGG GTGAGGTACT TGCTCTTGTT CTTGCTATAT CCGCACTGCT TGCTTTGACG CTTGTAGCAG TAAAAACTGA TAGAGCTGCC TCTGTGATGT GGGCAGCGCG TGACATTGCA GCCCAGCCAG GGCCACAGCC AGATTCAAAA CTACTCTCTG GTAATCAAGG GGTGTCCGTG ACCGAAGAAG GATCAATGAG AGAAGATGAG TCTCTGCTGC TTTTCTCTTG A
|
Protein sequence | MSNGSETSHS RSNTVRRGAR RLVAGVGFYA AYTGLVLLWA IFVVAYTALQ FLDQKDWSII CGGDGAVARG MLAAAALLVC LATLLFASQS KMHPDLCRKK VESLCQSKPD LEDVLIEADG ARTGNGAKVV LSVATVLAAI AVVLYPAMFK FAGVSNNNLY SRVGEVLALV LAISALLALT LVAVKTDRAA SVMWAARDIA AQPGPQPDSK LLSGNQGVSV TEEGSMREDE SLLLFS
|
| |