Gene NSE_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0041 
Symbol 
ID3932267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp31400 
End bp32296 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content44% 
IMG OID637900197 
Producthypothetical protein 
Protein accessionYP_505943 
Protein GI88608305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0073008 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAG ATGAATTGGC ACAGCACATA CAAAAGCTCT TTAGTGAAAA ATTAAAGCTG 
AATTTTGATC TTGAGGTTTT CAAAGATGCG CTTGGCCACC TTGATCCGAT GGAGATTGAT
GATCTGAGTG TCTACGTAGA CAGCTTAGCG AAATTTGGTT CGGAAGATAG CGTCATAAAA
AAGATGTTGG AGGCTGTGTG CAGTGAGAAA GAGTGTGGCA AGCAGTTAAC CGAGCTACTC
AATAGGTGGA ATGGCATTTT TCCAGATAAT CCTATACCTG CTATACCTGT TGTACCTGCG
CTAAAACCTG AAGTTGTGAG CACCGCAAAT AATGGGCTTA TAGCAGCAAC TGTGGTCTTG
GGGATTTTAT GTGCTTCTCT GTTGGCTGGA GGTACTGCGT ACATAATGCA TAGAAGAGCG
ACTGGATCTG TGAACCTTGA AGATCACTTC AAAAACAATA TCGAGCTGAT TGGTCTCAGA
AGTAACGTCG AGATGATCGA TAAAGGCACA ATGAAGGAGA CAGATAGGGG CACAATAGCA
GGATCGCCAC TAAAGCGGAG TGCTAGCATG TCAGATTTAC CACGAGATGC TTTTCCGGAT
GCTACCGAAC CACTAAGTCG GAGTTCTAGC AGGTCAGATT TATCACAAAA TGCTTCTGCG
GTTTCTAGCA AATCAACAGC ATCTGAGCTT ATCGAGCGTT TCAATTCACT CAGTGCTGCT
TCTCCGGTTA TTGGTAAATC ATCAAATCAG GGTACTGGTA CTCATAGTAC TAGCACTACT
AGCACGTCAG ATTTATCATA CAATACCAGC AAGCCAGAAA ATCTGCACGA CGGTCCTTCT
TCAAGCTTAG ATAAAGCGGA GCTTGATCAA GCCACTGGAC AGCTAACTAG GCTGTAG
 
Protein sequence
MNIDELAQHI QKLFSEKLKL NFDLEVFKDA LGHLDPMEID DLSVYVDSLA KFGSEDSVIK 
KMLEAVCSEK ECGKQLTELL NRWNGIFPDN PIPAIPVVPA LKPEVVSTAN NGLIAATVVL
GILCASLLAG GTAYIMHRRA TGSVNLEDHF KNNIELIGLR SNVEMIDKGT MKETDRGTIA
GSPLKRSASM SDLPRDAFPD ATEPLSRSSS RSDLSQNASA VSSKSTASEL IERFNSLSAA
SPVIGKSSNQ GTGTHSTSTT STSDLSYNTS KPENLHDGPS SSLDKAELDQ ATGQLTRL