Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0041 |
Symbol | |
ID | 3932267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 31400 |
End bp | 32296 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637900197 |
Product | hypothetical protein |
Protein accession | YP_505943 |
Protein GI | 88608305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0073008 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAG ATGAATTGGC ACAGCACATA CAAAAGCTCT TTAGTGAAAA ATTAAAGCTG AATTTTGATC TTGAGGTTTT CAAAGATGCG CTTGGCCACC TTGATCCGAT GGAGATTGAT GATCTGAGTG TCTACGTAGA CAGCTTAGCG AAATTTGGTT CGGAAGATAG CGTCATAAAA AAGATGTTGG AGGCTGTGTG CAGTGAGAAA GAGTGTGGCA AGCAGTTAAC CGAGCTACTC AATAGGTGGA ATGGCATTTT TCCAGATAAT CCTATACCTG CTATACCTGT TGTACCTGCG CTAAAACCTG AAGTTGTGAG CACCGCAAAT AATGGGCTTA TAGCAGCAAC TGTGGTCTTG GGGATTTTAT GTGCTTCTCT GTTGGCTGGA GGTACTGCGT ACATAATGCA TAGAAGAGCG ACTGGATCTG TGAACCTTGA AGATCACTTC AAAAACAATA TCGAGCTGAT TGGTCTCAGA AGTAACGTCG AGATGATCGA TAAAGGCACA ATGAAGGAGA CAGATAGGGG CACAATAGCA GGATCGCCAC TAAAGCGGAG TGCTAGCATG TCAGATTTAC CACGAGATGC TTTTCCGGAT GCTACCGAAC CACTAAGTCG GAGTTCTAGC AGGTCAGATT TATCACAAAA TGCTTCTGCG GTTTCTAGCA AATCAACAGC ATCTGAGCTT ATCGAGCGTT TCAATTCACT CAGTGCTGCT TCTCCGGTTA TTGGTAAATC ATCAAATCAG GGTACTGGTA CTCATAGTAC TAGCACTACT AGCACGTCAG ATTTATCATA CAATACCAGC AAGCCAGAAA ATCTGCACGA CGGTCCTTCT TCAAGCTTAG ATAAAGCGGA GCTTGATCAA GCCACTGGAC AGCTAACTAG GCTGTAG
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Protein sequence | MNIDELAQHI QKLFSEKLKL NFDLEVFKDA LGHLDPMEID DLSVYVDSLA KFGSEDSVIK KMLEAVCSEK ECGKQLTELL NRWNGIFPDN PIPAIPVVPA LKPEVVSTAN NGLIAATVVL GILCASLLAG GTAYIMHRRA TGSVNLEDHF KNNIELIGLR SNVEMIDKGT MKETDRGTIA GSPLKRSASM SDLPRDAFPD ATEPLSRSSS RSDLSQNASA VSSKSTASEL IERFNSLSAA SPVIGKSSNQ GTGTHSTSTT STSDLSYNTS KPENLHDGPS SSLDKAELDQ ATGQLTRL
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