Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0016 |
Symbol | tgt |
ID | 3931478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 13098 |
End bp | 14306 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637900173 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_505919 |
Protein GI | 88608023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAT CAGAAGTTTT CCCTCGATTC AATTACCTAG AAAATGGAAA AACCCGCTCG AGGAGAGGTA AAATAACAAC TAAGCATGGA GTGATACACA CACCAGCTTT CATATTTTGT GCAACCCGAG CAGCAATAAA AGGCTTGGAA ATACACCAAG TCAAAGAAGC CGGATCTCAA GTAATACTGT CAAATACCTA CCACTTGATG CTTAAACCCG GAGGAGAGCA TATAGAAAAA GCCGGTGGAA TACAGAAGTT CATGGGGTGG AATGGACCAA TGTTAACCGA TTCTGGAGGT TTTCAAGCCT TCAGCCTAAA TACAAAAGAT GAGACAAATA TACAAGAACT GAAAAGAAAA TACTCCAAGG CATTCAACAG TTCCGGCATT CTTGCAATAT CAGAAGAAGG AATAACCTGC AAATCTTACT ACGATGGAGC AAAGTTTTTC CTATCCCCTG AAAAATCGAT GGACGTTCAA ATAAAACTCG GAGCAGACCT AATTGTTGTG CTGGATGAAT GTACTAAATT CTCGTTGGAT AGAGAATACA ATAAGGAAGC CCTAGAAAGA AATAAAAGAT GGGCAGACAG GAGTCTCACA TACGCAGAAA AAAATCGAAA AGCATGGCAA GGAGTCTACG GAATTATACA TGGAGGAACC TTTGAAGATT TAAGAAAGGA AAGCGTCGAG TTCAACAACA GTCGGGAACT TTTTGGAAAT GCAATAGGTG GCTCTCTTGG AAGAACTAAA GAAGAAATGA AAGAGGTCGT GGAGATGTCT GTAACAAACC TAAACAGAGA AAGACCTATT CATCTACTTG GAATAGGTGG CATATCTGAT ATTTTTACGG GTGTTAGTAT GGGAGTGGAC ACCTTTGATT GTGTCCACCC AACTAGAATA GCCCGGCATG GAGGAGCTCT AATAAAATAC TCTTCCCACC CAGAAAACAA CGGCAGGGAA TACATAAATC TCAGAAACAA TATCTTCAAA AACTCCGATT CATCAATCGA TGAATCCTGC GATTGTAAAA TCTGTGAGAC TTACTCTTGC GGCTACCTAA ACTATTTGCT CTCTGTCAAA GAGAACATCG CGTTCAATAT GATCACCTAC CACAACATAT ACTTTATGAA TAAACTCATG GAAAGAATAA GACACACAAT AGAGAAGGAC TTAGATCTGG AAGAGCTAAA AAAACTCTAC TGTGGATAA
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Protein sequence | MHESEVFPRF NYLENGKTRS RRGKITTKHG VIHTPAFIFC ATRAAIKGLE IHQVKEAGSQ VILSNTYHLM LKPGGEHIEK AGGIQKFMGW NGPMLTDSGG FQAFSLNTKD ETNIQELKRK YSKAFNSSGI LAISEEGITC KSYYDGAKFF LSPEKSMDVQ IKLGADLIVV LDECTKFSLD REYNKEALER NKRWADRSLT YAEKNRKAWQ GVYGIIHGGT FEDLRKESVE FNNSRELFGN AIGGSLGRTK EEMKEVVEMS VTNLNRERPI HLLGIGGISD IFTGVSMGVD TFDCVHPTRI ARHGGALIKY SSHPENNGRE YINLRNNIFK NSDSSIDESC DCKICETYSC GYLNYLLSVK ENIAFNMITY HNIYFMNKLM ERIRHTIEKD LDLEELKKLY CG
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