Gene NSE_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0004 
Symbol 
ID3932223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp3639 
End bp4886 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content35% 
IMG OID637900161 
Producthypothetical protein 
Protein accessionYP_505907 
Protein GI88608480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0178798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGATT ACGTAGTAGT TGGGGGAGGG ATAGAATCTT TTTTGTTATG TTTTCTGATT 
TTATACAATA CTGGAAGAAG CAACATAGCC TTTGTTACGA AAAGTCCACC TGACATGTCC
AAGGACTCTT CATTATCGAA GGTGGGGCTT AGACATGTTA GTACATCGGA ATACACAAAT
TTCCTTTCAA AATTTCATAT AAACGCTTTT TCTAGGAGTG TCCCTTCAGG TGGATGGAAT
GGAATAGATA GGGCACTGAG AACGCACGAA AAATATTGGC TAAAAAAACG GCTTCTAGAA
AGGCGTTTTT TTTATCAAAA TTTAGATTAC AAATTAAAAA ACTTGGCATT TAAAGGTCCT
CTCTTGTGGA AAAAGTTTTT ATCTAGCCAT CCAGAATTTT CTACAGATAT TGATTTAATC
GAAGGCATCT ATGCGATCTC CAATCACTGT GAAAGTGGTA AAGGTAGCAC ACAGCCACTA
AGAATAGATG ACATAGAAAG GAATTTAATT TGTGGAAGAA GTGTATCTTT CGAAAGTGAC
GGATTTAGCT TTAACTCGCT TAAATTTTGC AAAAAAATAG GAGATTTCTT AAGTAAAAAT
GGAATTAGTT TTTTTTACAA TACTGAGATT TCAAAGATAG ATTTTGCCAG CAATAAGAAG
CTTAAGTATG TGATTTCATC ACGTGGCGAA ATTTTCCATG GGAAAAACTA TTTTATTGCC
ATAGGAGCCA ACTCTTTTGG TTATAATGAC TATTTCAATT TACGAAAATT AACTCAACCA
ATTGTTGGTG CATGGTACCT TGTACATGAT GTGAATCTCA AACATCCGTG CAAGTATAAT
AACTATGTTG GTCCAACCCT GACTTTTTGG CAAAACTACA CTCCGGTTTC CTATAACGAT
TTTATCAAAT CTGAAAATCC CAACTCTCAA GATGGGAAAA AAGCTGTAGT TGTAGGTACC
GGTTGTATGT GGAAAGGGTC AATTTATGGT AGTGGTCATT TAAATGTCGA GTTTATCAAA
AGAAACGAGA GACTTATAAA AGATTTATTT CCTGGAAAGG AAGTAACTCT ACTTGATGGA
AACTGCCCAA GGAATCTTTC ATATAATTCT TTACCAATTA TTAATCACGG CGATAGCTTA
AGTGGGAAGT ATCTTTCTGT ATCTGGTTCT GGAACATTTA CAACTGCAAA TGCAGTGAAT
TCAGCATCTG AAGCGGTCGA ATTTTTTCTT AACAACAGAC GACGCTAG
 
Protein sequence
MYDYVVVGGG IESFLLCFLI LYNTGRSNIA FVTKSPPDMS KDSSLSKVGL RHVSTSEYTN 
FLSKFHINAF SRSVPSGGWN GIDRALRTHE KYWLKKRLLE RRFFYQNLDY KLKNLAFKGP
LLWKKFLSSH PEFSTDIDLI EGIYAISNHC ESGKGSTQPL RIDDIERNLI CGRSVSFESD
GFSFNSLKFC KKIGDFLSKN GISFFYNTEI SKIDFASNKK LKYVISSRGE IFHGKNYFIA
IGANSFGYND YFNLRKLTQP IVGAWYLVHD VNLKHPCKYN NYVGPTLTFW QNYTPVSYND
FIKSENPNSQ DGKKAVVVGT GCMWKGSIYG SGHLNVEFIK RNERLIKDLF PGKEVTLLDG
NCPRNLSYNS LPIINHGDSL SGKYLSVSGS GTFTTANAVN SASEAVEFFL NNRRR