Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0004 |
Symbol | |
ID | 3932223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 3639 |
End bp | 4886 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637900161 |
Product | hypothetical protein |
Protein accession | YP_505907 |
Protein GI | 88608480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0178798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGATT ACGTAGTAGT TGGGGGAGGG ATAGAATCTT TTTTGTTATG TTTTCTGATT TTATACAATA CTGGAAGAAG CAACATAGCC TTTGTTACGA AAAGTCCACC TGACATGTCC AAGGACTCTT CATTATCGAA GGTGGGGCTT AGACATGTTA GTACATCGGA ATACACAAAT TTCCTTTCAA AATTTCATAT AAACGCTTTT TCTAGGAGTG TCCCTTCAGG TGGATGGAAT GGAATAGATA GGGCACTGAG AACGCACGAA AAATATTGGC TAAAAAAACG GCTTCTAGAA AGGCGTTTTT TTTATCAAAA TTTAGATTAC AAATTAAAAA ACTTGGCATT TAAAGGTCCT CTCTTGTGGA AAAAGTTTTT ATCTAGCCAT CCAGAATTTT CTACAGATAT TGATTTAATC GAAGGCATCT ATGCGATCTC CAATCACTGT GAAAGTGGTA AAGGTAGCAC ACAGCCACTA AGAATAGATG ACATAGAAAG GAATTTAATT TGTGGAAGAA GTGTATCTTT CGAAAGTGAC GGATTTAGCT TTAACTCGCT TAAATTTTGC AAAAAAATAG GAGATTTCTT AAGTAAAAAT GGAATTAGTT TTTTTTACAA TACTGAGATT TCAAAGATAG ATTTTGCCAG CAATAAGAAG CTTAAGTATG TGATTTCATC ACGTGGCGAA ATTTTCCATG GGAAAAACTA TTTTATTGCC ATAGGAGCCA ACTCTTTTGG TTATAATGAC TATTTCAATT TACGAAAATT AACTCAACCA ATTGTTGGTG CATGGTACCT TGTACATGAT GTGAATCTCA AACATCCGTG CAAGTATAAT AACTATGTTG GTCCAACCCT GACTTTTTGG CAAAACTACA CTCCGGTTTC CTATAACGAT TTTATCAAAT CTGAAAATCC CAACTCTCAA GATGGGAAAA AAGCTGTAGT TGTAGGTACC GGTTGTATGT GGAAAGGGTC AATTTATGGT AGTGGTCATT TAAATGTCGA GTTTATCAAA AGAAACGAGA GACTTATAAA AGATTTATTT CCTGGAAAGG AAGTAACTCT ACTTGATGGA AACTGCCCAA GGAATCTTTC ATATAATTCT TTACCAATTA TTAATCACGG CGATAGCTTA AGTGGGAAGT ATCTTTCTGT ATCTGGTTCT GGAACATTTA CAACTGCAAA TGCAGTGAAT TCAGCATCTG AAGCGGTCGA ATTTTTTCTT AACAACAGAC GACGCTAG
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Protein sequence | MYDYVVVGGG IESFLLCFLI LYNTGRSNIA FVTKSPPDMS KDSSLSKVGL RHVSTSEYTN FLSKFHINAF SRSVPSGGWN GIDRALRTHE KYWLKKRLLE RRFFYQNLDY KLKNLAFKGP LLWKKFLSSH PEFSTDIDLI EGIYAISNHC ESGKGSTQPL RIDDIERNLI CGRSVSFESD GFSFNSLKFC KKIGDFLSKN GISFFYNTEI SKIDFASNKK LKYVISSRGE IFHGKNYFIA IGANSFGYND YFNLRKLTQP IVGAWYLVHD VNLKHPCKYN NYVGPTLTFW QNYTPVSYND FIKSENPNSQ DGKKAVVVGT GCMWKGSIYG SGHLNVEFIK RNERLIKDLF PGKEVTLLDG NCPRNLSYNS LPIINHGDSL SGKYLSVSGS GTFTTANAVN SASEAVEFFL NNRRR
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