Gene NATL1_21891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21891 
SymbolrpsF 
ID4779397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1849934 
End bp1850350 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content39% 
IMG OID640085487 
Product30S ribosomal protein S6 
Protein accessionYP_001016009 
Protein GI124026894 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA CACCCTATTA CGAAACCATG TACATTCTTC GTCCGGATAT ACCGGAAGAA 
GAAGTTGATA GCCATTTAAA AAAATATAGT GCGATTCTTG AGAAGTCTGA AACTGAAGTA
TTAGATAGTC AAATGAGAGG CAAAAGAAGG CTTGCTTATC CAATTGCAAA ACATAAAGAG
GGAATATATG TGCAATTGAG TCACAAAGGC AACGGACAAC AAGTTGCAAC CTTAGAGAGA
GCCATGAGGT TAAGTGAGGA TGTTATTCGC TACATCACAG TGAAACAAGA TGGTCCTTTG
CCAACTCCAA AACCAACTTC CAAAGAAGAC GAAACAGAAA AGGAAGAAGT AAAACCTACT
GAAGACAAAA CTGAATCACC TGCACAAGAG GAGAAGAAAG AAGACTCTAA GGAATAA
 
Protein sequence
MSETPYYETM YILRPDIPEE EVDSHLKKYS AILEKSETEV LDSQMRGKRR LAYPIAKHKE 
GIYVQLSHKG NGQQVATLER AMRLSEDVIR YITVKQDGPL PTPKPTSKED ETEKEEVKPT
EDKTESPAQE EKKEDSKE