Gene NATL1_21251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21251 
Symbol 
ID4780925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1782092 
End bp1782748 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID640085422 
ProductClp protease proteolytic subunit 
Protein accessionYP_001015945 
Protein GI124026830 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAAG CAAGACAAAA TCACCCCATT CATAGTTTAT GGAATAACTC CTCTCTATTT 
TCAGGACCGG GAGTGTTACC AACAGTAATC GAACAATCAG GTCAAGGTGA TAGGGCATTT
GATATTTACT CTCGGTTACT TCGTGAAAGA ATCATCTTTC TAGGAACTGA TGTAAATGAT
CAAGTTGCTG ATGCATTAGT AGCTCAAATG CTTTTTTTAG AAGCTGATGA TCCAGAAAAA
GATATTCAGC TGTACGTGAA CTCTCCTGGA GGGTCAGTAA CTGCGGGCCT GGCTATTTAC
GACACCATGC AGCAAGTTAG TCCGGATGTC ATAACAATTT GCTACGGGCT TGCAGCAAGC
ATGGGTGCTT TTCTTCTCTC TGGAGGGACA AAAGGGAAAA GACTTGCATT GCCAAATTCG
AGAATAATGA TTCATCAACC TCTTGGTGGA GCTCAGGGTC AAGCTGTCGA AATTGAAATT
CAAGCCAAAG AAATTCTCTA TTTAAAAGAG ACTCTTAATT CACTTTTGGC TGAGCATACT
GGACAAAATA TTCAAAAAAT TTCAGAAGAC ACTGATCGAG ACCACTTTCT TTCTCCCCAA
GAAGCGGTTG AATATGGCCT GATCGACAAA GTGGTTTCTA ATCTCAACTC CATATGA
 
Protein sequence
MIEARQNHPI HSLWNNSSLF SGPGVLPTVI EQSGQGDRAF DIYSRLLRER IIFLGTDVND 
QVADALVAQM LFLEADDPEK DIQLYVNSPG GSVTAGLAIY DTMQQVSPDV ITICYGLAAS
MGAFLLSGGT KGKRLALPNS RIMIHQPLGG AQGQAVEIEI QAKEILYLKE TLNSLLAEHT
GQNIQKISED TDRDHFLSPQ EAVEYGLIDK VVSNLNSI