Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_20611 |
Symbol | fabF |
ID | 4780034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1704787 |
End bp | 1706034 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640085357 |
Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
Protein accession | YP_001015881 |
Protein GI | 124026766 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGA AACTCCATCG AGTTGTTATT ACAGGTCTTG GCGCCATTAC TCCAATTGGC AACGACCTCG AAAGTTACCT CAAAGGGCTT CAATCCGGGA AAAATGGGGT AGATCAAATA ACACTCTTTG ATGCCTCATC CCATGCATGC AGATTTGCAG CAGAGGTGAA AAGTTTTGAT CCTACTGGCA AATTAGAGCC AAAAGAATCC AAACGATGGG ATCGTTTTTC AAAATTTGGA GTCATTGCAG CAAAAGAAGC CTTGAATCAT TCAGGTCTAA TAATTGACAA CTCAAATTCT GGAAGAATTG GTGTGATTAT TGGTTCTGGA GTTGGCGGAT TGCTGACTAT GGAAACCCAA GCTCATGTTT TAGAGAACAA GGGAGCAAGT CGAGTTAGTC CTTTTACTGT TCCCATGATG ATTCCCAACA TGGCTACAGG GTTAGCAGCT ATTGCACTAG GTGCTAAAGG TCCAAGTTCA GCAGTTTCAA CTGCTTGTGC CGCCGGATCA AATGCTATAG GTGATGCATT CAGACTGCTC CAATTAGGCA AAGCAGATGC AATGGTTTGC GGTGGAGCAG AAGCAAGTAT CACTCCTCTA GGAGTAGCAG GATTTGCTAG TGCAAAAGCT TTATCCTTCA GAAATGATGA TCCATCTACC GCAAGTAGAC CTTTTGATTC TCAACGAGAT GGATTTGTAA TTGGAGAAGG GGCCGGAGTA CTAATTTTAG AAACTCTTGA TCATGCATTA AAAAGAGACG CAACAATCCA TGCAGAGATC ATTGGTTATG GAACCACTTG TGATGCTCAT CACATTACCT CTCCTACACC TGGTGGAGTG GGAGGGGCAG AAGCTATGAA ACTTGCATTA ATTGATGGAC AAATTAATCC CGAAGAAGTC GATTACATTA ATGCTCACGG AACTAGCACT CCAGCCAATG ACAGCAATGA AACATCTGCT ATAAAAGCTG CTTTGGGAAA TCATGCGTAT CAAGTACCTA CAAGCTCAAC CAAATCTATG ACTGGGCACT TACTAGGAGG GTCTGGTGGA ATCGAAGCTG TTGCTTGTGC TCTGGCAATA AAACATGAAA TAATTCCGCC AACAATTAAT TATTCCAATC CAGACCCAAA TTGTGATCTT GATTATGTGC CCAACAAAGC AAGAGAAAAG AAATTAGGTG TCGTACTATC TAACTCATTC GGGTTTGGCG GTCACAATGT CTGTCTAGCT TTTCGACAAA TGATCTAA
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Protein sequence | MMEKLHRVVI TGLGAITPIG NDLESYLKGL QSGKNGVDQI TLFDASSHAC RFAAEVKSFD PTGKLEPKES KRWDRFSKFG VIAAKEALNH SGLIIDNSNS GRIGVIIGSG VGGLLTMETQ AHVLENKGAS RVSPFTVPMM IPNMATGLAA IALGAKGPSS AVSTACAAGS NAIGDAFRLL QLGKADAMVC GGAEASITPL GVAGFASAKA LSFRNDDPST ASRPFDSQRD GFVIGEGAGV LILETLDHAL KRDATIHAEI IGYGTTCDAH HITSPTPGGV GGAEAMKLAL IDGQINPEEV DYINAHGTST PANDSNETSA IKAALGNHAY QVPTSSTKSM TGHLLGGSGG IEAVACALAI KHEIIPPTIN YSNPDPNCDL DYVPNKAREK KLGVVLSNSF GFGGHNVCLA FRQMI
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