Gene NATL1_20611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20611 
SymbolfabF 
ID4780034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1704787 
End bp1706034 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content42% 
IMG OID640085357 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_001015881 
Protein GI124026766 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGA AACTCCATCG AGTTGTTATT ACAGGTCTTG GCGCCATTAC TCCAATTGGC 
AACGACCTCG AAAGTTACCT CAAAGGGCTT CAATCCGGGA AAAATGGGGT AGATCAAATA
ACACTCTTTG ATGCCTCATC CCATGCATGC AGATTTGCAG CAGAGGTGAA AAGTTTTGAT
CCTACTGGCA AATTAGAGCC AAAAGAATCC AAACGATGGG ATCGTTTTTC AAAATTTGGA
GTCATTGCAG CAAAAGAAGC CTTGAATCAT TCAGGTCTAA TAATTGACAA CTCAAATTCT
GGAAGAATTG GTGTGATTAT TGGTTCTGGA GTTGGCGGAT TGCTGACTAT GGAAACCCAA
GCTCATGTTT TAGAGAACAA GGGAGCAAGT CGAGTTAGTC CTTTTACTGT TCCCATGATG
ATTCCCAACA TGGCTACAGG GTTAGCAGCT ATTGCACTAG GTGCTAAAGG TCCAAGTTCA
GCAGTTTCAA CTGCTTGTGC CGCCGGATCA AATGCTATAG GTGATGCATT CAGACTGCTC
CAATTAGGCA AAGCAGATGC AATGGTTTGC GGTGGAGCAG AAGCAAGTAT CACTCCTCTA
GGAGTAGCAG GATTTGCTAG TGCAAAAGCT TTATCCTTCA GAAATGATGA TCCATCTACC
GCAAGTAGAC CTTTTGATTC TCAACGAGAT GGATTTGTAA TTGGAGAAGG GGCCGGAGTA
CTAATTTTAG AAACTCTTGA TCATGCATTA AAAAGAGACG CAACAATCCA TGCAGAGATC
ATTGGTTATG GAACCACTTG TGATGCTCAT CACATTACCT CTCCTACACC TGGTGGAGTG
GGAGGGGCAG AAGCTATGAA ACTTGCATTA ATTGATGGAC AAATTAATCC CGAAGAAGTC
GATTACATTA ATGCTCACGG AACTAGCACT CCAGCCAATG ACAGCAATGA AACATCTGCT
ATAAAAGCTG CTTTGGGAAA TCATGCGTAT CAAGTACCTA CAAGCTCAAC CAAATCTATG
ACTGGGCACT TACTAGGAGG GTCTGGTGGA ATCGAAGCTG TTGCTTGTGC TCTGGCAATA
AAACATGAAA TAATTCCGCC AACAATTAAT TATTCCAATC CAGACCCAAA TTGTGATCTT
GATTATGTGC CCAACAAAGC AAGAGAAAAG AAATTAGGTG TCGTACTATC TAACTCATTC
GGGTTTGGCG GTCACAATGT CTGTCTAGCT TTTCGACAAA TGATCTAA
 
Protein sequence
MMEKLHRVVI TGLGAITPIG NDLESYLKGL QSGKNGVDQI TLFDASSHAC RFAAEVKSFD 
PTGKLEPKES KRWDRFSKFG VIAAKEALNH SGLIIDNSNS GRIGVIIGSG VGGLLTMETQ
AHVLENKGAS RVSPFTVPMM IPNMATGLAA IALGAKGPSS AVSTACAAGS NAIGDAFRLL
QLGKADAMVC GGAEASITPL GVAGFASAKA LSFRNDDPST ASRPFDSQRD GFVIGEGAGV
LILETLDHAL KRDATIHAEI IGYGTTCDAH HITSPTPGGV GGAEAMKLAL IDGQINPEEV
DYINAHGTST PANDSNETSA IKAALGNHAY QVPTSSTKSM TGHLLGGSGG IEAVACALAI
KHEIIPPTIN YSNPDPNCDL DYVPNKAREK KLGVVLSNSF GFGGHNVCLA FRQMI