Gene NATL1_19341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19341 
SymbolrbpD 
ID4779549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1588663 
End bp1588911 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content39% 
IMG OID640085224 
Producthypothetical protein 
Protein accessionYP_001015754 
Protein GI124026639 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.39481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT ACATCGGGAA TCTCTCGTTT GATGCAGAGG TTGAAGATAT TGTTGGTGTC 
TTTAGCAGTT ATGGTGAAGT CACTAATTGT AAGCTTCCAT TAGAAAGAGA AACTGGGAGA
AAAAGAGGTT TCGCTTTTGT TGACATGGGC GATGATGCTC AAGAACAAAA AGCAATCGAC
GATCTTCAAG ATGTGGAATG GATGGGTAGG GCTATTAGAG TTACAAAAGC TAGACCCAAA
AATAATTAA
 
Protein sequence
MTIYIGNLSF DAEVEDIVGV FSSYGEVTNC KLPLERETGR KRGFAFVDMG DDAQEQKAID 
DLQDVEWMGR AIRVTKARPK NN