Gene NATL1_16801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16801 
SymbollexA 
ID4779434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1369052 
End bp1369660 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content41% 
IMG OID640084964 
ProductSOS function regulatory protein, LexA repressor 
Protein accessionYP_001015500 
Protein GI124026385 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAG AAACTCTAAC TACTGCACAG CAAGAACTCT ATGACTGGCT TGTAGATTTT 
ATTGAAGATC ATCATCACAG CCCTTCGATC AGGCAAATGA TGCAAGCTAT GGGTCTAAGA
TCTCCGGCAC CAATCCAAAG TCGTCTAAGA CATTTACAAC AAAAAGGGTG GATAAAATGG
CAAGAAGGTC AGGCAAGAAC GCTGCAATTA ATAGAGGAGA GTATTTCTGG GGTACCTGTT
TTGGGAGCAA TAGCTGCAGG TGGGTTGGTT GAAACTTTTG ATGATGTACA GGAAACTCTA
GACTTAAATT CAGTTCTTCA ATTAAAGGGA CTTTTTGCCT TGACGGTAAA TGGAGATTCA
ATGATTGATT CTTTTATTGC AGACGGAGAT ATGGTTCTAA TGGAACCTGT TAATGAGCCC
GCTCGTCTGA GAAACGGAAC GATTGTTAGC GCAATGGTTC CAGGATTAGG AACTACTTTG
AAACATTTTT TTCGTGATGG AAGTTTAGTC CGTTTAGAGG CCGCCAATAC ATCTTATGAC
CCTATAGAAA TTGATGCTGA ACAAGTTCAT ATTCAGGGAA AGTTAGCAGC TGTATGGAGG
AAAACTTGA
 
Protein sequence
MPEETLTTAQ QELYDWLVDF IEDHHHSPSI RQMMQAMGLR SPAPIQSRLR HLQQKGWIKW 
QEGQARTLQL IEESISGVPV LGAIAAGGLV ETFDDVQETL DLNSVLQLKG LFALTVNGDS
MIDSFIADGD MVLMEPVNEP ARLRNGTIVS AMVPGLGTTL KHFFRDGSLV RLEAANTSYD
PIEIDAEQVH IQGKLAAVWR KT