| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_16081 |
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| Symbol | psbC |
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| ID | 4781055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1314949 |
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| End bp | 1316331 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640084890 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_001015430 |
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| Protein GI | 124026314 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.548682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAG TTTACTCAAC GCTCCTAATC AAAGCCTTGA AGAGACTGGT
TACGCCTGGT ATGTAGGAAA TGCAAGGCTA ATCAATCTTT CAGGAAGACT TTTAGGTGCT
CACATTGCTC ACGCAGGACT AATTGTGTTC TGGGCAGGCG CGATGATGCT TTTCGAAGTA
AGTCACTTCA CCATGGATAA ACCCATGTGG GAACAAGGCT TAATTTGTAT GCCTCACGTA
GCCATGTTTG GATACGGCAT TGGTCCAGGT GGAGAAGTCA CTGATGTATG GCCTTTCTTC
ATTGCTGGTG TTATTCACCT AGTTGCATCT GGAATCCTTG GCTTTGGTGG TGTTTTTCAC
TCCCTTGCAG GACCAGAGAA ACTTGAAGAA GATTTCCCAT TCTTCTCCAC TGACTGGAGA
GATAAAAACC AAATGACCAA TATTCTTGGT TTTCATTTGG TTGTTCTTGG TGTTGGAGCT
CTTCTATGGT CCATTAACTG GATGTATATA GGTGGTGCAT ACGACACTTG GGCTCCAGGT
GGAGGAGAAG TTAGGTTGAT CAACCCAACA CTCGATCCAA GAATTATTTT TGGATATCTG
CTATCAACCC CTTGGGGTGG TGGTGGTTGG ATGGTTGGTG TTAACTCAAT GGAAGATATT
GTCGGAGGAC ATGTTTACCT GGGAGTGATT GAAATAATTG GTGGTCTTTT CCATATCTTC
ACTCAGCCTT ATGGGTGGGC AAGGAGAGCC TTTATCTGGA ACGGTGAAGG ACTTCTAAGT
TATGCATTAG GTGGAATCTG TGTCGCAAGT TTTGTTGCCT CATGTTTCAT CTGGTTTAAC
AACACTGCTT ATCCATCTGA GTTCTACGGC CCAACAAACG CTGAAGCTTC TCAGGCCCAA
AGTTTTACAT TCCTGGTTCG TGACCAACGA ATTGGAGCAA ATGTAGGTTC AACAATGGGT
CCTACTGGTT TAGGAAAATA CCTAATGCGT TCTCCTACTG GTGAAATCAT CTTTGGTGGA
GAAACTATGC GTTTTTGGGA TTTCCGAGGA CCATGGCTTG AGCCTCTTAG AGGACCAAAT
GGTCTCAGCC TTGAGAAGAT TCAAAATGAT ATTCAGCCTT GGCAAGTTCG CCGTGCTGCT
GAATACATGA CACATGCTCC AAACGCTTCT ATCAACTCAG TTGGTGGAAT CATTACTGAG
CCTAACGCTG TTAACTTTGT TAACTTGCGT CAATGGCTAG CTGGTGCTCA ATTCTTCCTT
GGTTGGTTTA CTTTTGTAGG TCATCTTTGG CATGCTGGTC GTGCTAGAGC CGCTGCAGCT
GGATTTGAAA AAGGTATCAG TCGTTCACAA GAGCCTGCTC TTTCAATGCC TGATCTAGAT
TAG
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| Protein sequence | METPFNSLLN APNQSLEETG YAWYVGNARL INLSGRLLGA HIAHAGLIVF WAGAMMLFEV
SHFTMDKPMW EQGLICMPHV AMFGYGIGPG GEVTDVWPFF IAGVIHLVAS GILGFGGVFH
SLAGPEKLEE DFPFFSTDWR DKNQMTNILG FHLVVLGVGA LLWSINWMYI GGAYDTWAPG
GGEVRLINPT LDPRIIFGYL LSTPWGGGGW MVGVNSMEDI VGGHVYLGVI EIIGGLFHIF
TQPYGWARRA FIWNGEGLLS YALGGICVAS FVASCFIWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGSTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAGAQFFL
GWFTFVGHLW HAGRARAAAA GFEKGISRSQ EPALSMPDLD
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