Gene NATL1_15611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_15611 
Symbol 
ID4780661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1267788 
End bp1268852 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content43% 
IMG OID640084843 
Producthypothetical protein 
Protein accessionYP_001015383 
Protein GI124026267 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.732375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.917864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCT ATGGAAATCC AGATGTCACC TACGGGTGGT GGGCTGGTAA TTCAAGGGTT 
ACTAACCGCG CTGGAAAGTT CATTGCAGCC CATGCTGGTC ATACTGGCCT AATTTCATTT
GCTGCAGGAG CTAGCACTCT TTGGGAGCTA GCTAGGTTTG ATCCATCTAT AGCTATGGGG
CATCAAAGCT CTATCTTTCT CGCTCATCTT GCATCTATTG GAATTGGATT TGATGATGCA
GGTGTTTGGA CTGGAGCGAA TGTTGCTTCA GTAGCAATTG TCCATATTAT TGCTTCTCTT
GTTTATGCAG GAGGAGCTCT TTCTCACTCT CTGCTCTTTG ATGGGGATTT GGCTGATGGG
CCAGGACCTA CTACTCAGAA ATTCAAGCTT GAATGGGACA ATCCCGATAA TTTGACATTT
ATTTTGGGTC ACCATCTTAT TTTCTTTGGG GTGGCTTGTA TTGCTTTTGT TGAATGGGCC
AGAATTCACG GAATTTATGA CCCAGCAATA GGAGCTGTTC GACAAGTTGA GTACAACCTT
AATTTGACCA ATATTTGGAA CCATCAGTTT GATTTCTTAG CTATAGATAA TCTTGAAGAT
GTTTTGGGCG GCCATGCGTT TTTAGCATTT GTTGAGATAA CTGGTGGTGC TTTCCATATC
GCAACTAAGC AGGTAGGAGA ATACACAGAA TTCAAAGGAG CTGGGATCCT TTCTGCCGAG
GCTGTTTTAT CTTTCTCATT GGCAGGTATT GGTTGGATGG CGATTGTCGC AGCATTCTGG
TGCGCAACAA ATACAACTGT TTATCCTGAA CCTTGGTTTG GAGAGCCTTT GGCTTTGAAA
TTTGGAATTT CTCCCTATTG GATCGATACT GTAGAGGTAA GTGAGAGCAC TGCACTAGCA
GGTCACACCA CAAGAGCTGC TTTAACAAAT GTCCATTATT ATTTTGGATT CTTCTTCTTA
CAAGGTCATT TATGGCATGC TATTCGTGCA TTAGGCTTTG ACTTTAGGAG AGTTACAAAT
GCTGTAGCTG GTTTAGATAG GGCACAAATC ACTCTTAATG ACTAA
 
Protein sequence
MQTYGNPDVT YGWWAGNSRV TNRAGKFIAA HAGHTGLISF AAGASTLWEL ARFDPSIAMG 
HQSSIFLAHL ASIGIGFDDA GVWTGANVAS VAIVHIIASL VYAGGALSHS LLFDGDLADG
PGPTTQKFKL EWDNPDNLTF ILGHHLIFFG VACIAFVEWA RIHGIYDPAI GAVRQVEYNL
NLTNIWNHQF DFLAIDNLED VLGGHAFLAF VEITGGAFHI ATKQVGEYTE FKGAGILSAE
AVLSFSLAGI GWMAIVAAFW CATNTTVYPE PWFGEPLALK FGISPYWIDT VEVSESTALA
GHTTRAALTN VHYYFGFFFL QGHLWHAIRA LGFDFRRVTN AVAGLDRAQI TLND