Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_14821 |
Symbol | psbP |
ID | 4780295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1193650 |
End bp | 1194195 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640084763 |
Product | photosystem II oxygen evolving complex protein PsbP |
Protein accession | YP_001015304 |
Protein GI | 124026188 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.400899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAAT TTTTTAGAAC ATCTTTTAAA TCCCTTTTAG CCATAGCGTT GGTCTTGACG CTTGGAGCTT GCTCTACAGG AGGAGCTGCA GGCTTGGAAC CTTTTAAAAG TCAAGATGGA CGTTATGGTT TTCTTTTCCC AACAGGGTGG ACGAGAGTGG CCGTCGATAA TGGACCAGAG GTTGTTTACC ATGACTTGAT TAACTCCGAT GAAACTCTCA GTCTCGTTAT TTCTAAATTA GAAAATGAAG TGGATTTAGA TGATTTGGGT GGAGCGGATG CTGTAGGGGA AAGACTTTTC GGTGAGAAAA ATAGTAACAA TCCTATTCGA TTGATTGATG CTTCAGAGAG AGAAGTTGAT CAACGCAAAT TCTATGATCT TGAATACTCT GTTGATTCAG AAGTAAACAA CAGGCACGAA TTCGCTACTG TCGTAGTAGA TAGAGGTTAT TTATATACGC TTGCAGCTAG CACTAGTGAA GAACGCTGGT CAAAAATGCA AGATACTTTT AAAAGAGTAG TTAGTTCTTT TACTTTTTTC ATATGA
|
Protein sequence | MIKFFRTSFK SLLAIALVLT LGACSTGGAA GLEPFKSQDG RYGFLFPTGW TRVAVDNGPE VVYHDLINSD ETLSLVISKL ENEVDLDDLG GADAVGERLF GEKNSNNPIR LIDASEREVD QRKFYDLEYS VDSEVNNRHE FATVVVDRGY LYTLAASTSE ERWSKMQDTF KRVVSSFTFF I
|
| |