Gene NATL1_14821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_14821 
SymbolpsbP 
ID4780295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1193650 
End bp1194195 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content39% 
IMG OID640084763 
Productphotosystem II oxygen evolving complex protein PsbP 
Protein accessionYP_001015304 
Protein GI124026188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.400899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TTTTTAGAAC ATCTTTTAAA TCCCTTTTAG CCATAGCGTT GGTCTTGACG 
CTTGGAGCTT GCTCTACAGG AGGAGCTGCA GGCTTGGAAC CTTTTAAAAG TCAAGATGGA
CGTTATGGTT TTCTTTTCCC AACAGGGTGG ACGAGAGTGG CCGTCGATAA TGGACCAGAG
GTTGTTTACC ATGACTTGAT TAACTCCGAT GAAACTCTCA GTCTCGTTAT TTCTAAATTA
GAAAATGAAG TGGATTTAGA TGATTTGGGT GGAGCGGATG CTGTAGGGGA AAGACTTTTC
GGTGAGAAAA ATAGTAACAA TCCTATTCGA TTGATTGATG CTTCAGAGAG AGAAGTTGAT
CAACGCAAAT TCTATGATCT TGAATACTCT GTTGATTCAG AAGTAAACAA CAGGCACGAA
TTCGCTACTG TCGTAGTAGA TAGAGGTTAT TTATATACGC TTGCAGCTAG CACTAGTGAA
GAACGCTGGT CAAAAATGCA AGATACTTTT AAAAGAGTAG TTAGTTCTTT TACTTTTTTC
ATATGA
 
Protein sequence
MIKFFRTSFK SLLAIALVLT LGACSTGGAA GLEPFKSQDG RYGFLFPTGW TRVAVDNGPE 
VVYHDLINSD ETLSLVISKL ENEVDLDDLG GADAVGERLF GEKNSNNPIR LIDASEREVD
QRKFYDLEYS VDSEVNNRHE FATVVVDRGY LYTLAASTSE ERWSKMQDTF KRVVSSFTFF
I