| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14781 |
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| Symbol | recD |
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| ID | 4781128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1187910 |
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| End bp | 1189631 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640084759 |
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| Product | exodeoxyribonuclease V 67 kD polypeptide |
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| Protein accession | YP_001015300 |
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| Protein GI | 124026184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.922098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.231202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATATT CCTTGGAAAA ACTTTTTTCA ACTGATTTAA ATAAATCATT ATTGGCTACT
CTAATTCGCT ATTACCCACC GATAGATTCT AATGAAGCTT TAATAGATAT TGTAAATGTA
TTAATGGATG GATTATCAAG AGGCGATGTT TACATAGACA TGAAGAAAAT CCCTGAAAAT
CTTGAACTTA AATATAAAAA TTGGCCCAGC TATCATATGA AAGCATTACT AGATAGTGGC
TGGACTAAAG GAGATAACTC CCCAATAGTT TTAGATGGAG ATTTGATTAG TTGGCGTCGT
ACACATAATG AGATAGTTGA GACCATTCAA AAAATACTAT TAAGGAATCA ACCTATTAAT
AACCTTTCTA AAGAATTACC TGTTCGAATT GATGATAAGA ATCTAGCGCA TCTAAATATT
CAACAAAAAG AAGCTGTTAA CCTTGTTAAA AGTGAACAAA TCATATTATT AAGTGGTGGC
CCAGGCACAG GCAAAACAAG TACCATTCTT CAAATGCTTT TACAAGCACT AACAAGAAAT
CCGACTCTTG ATATTGCAAT GGCTGCTCCA ACAGGGAAAG CCGCAAAAAA ACTAAAAGAT
ACTATTCAGG CGGGTATTGA AGATTTTGAT GATCCTGTAA AGGATAAGCT TTCTAACATT
CCTTCGAAAA CATTACATAA ATGGTTAGAA GCAAGTCCAA ATGGCTTCAG AAGGAACTCT
CAACGTCTAT TAAAATTAGA CCTCATCGTC ATAGATGAGA TGTCAATGGT TGACTTGCCA
ACCATAAATG GATTACTCGA TGCATTAACA AAATCATGTC AAATAATCTT AGTAGGTGAT
CCTGACCAAT TATTGCCAAT AGGAAGTGGT GGTATATGGC AAATTTTGCA AGAGAAAAAA
ACGAAAACAC ACTTTCATGC AAACTCAGTC AAGCTAACAA AGTCATACCG AAACAAAGGT
GATATCGCGT TATTAAGAAA TACATTAAAA GATAAAGGAG TAGATGCGTT TTGGCACCTG
CTTTCAACAA AAGAAGATTC AACAAATACA CTTAAGTACC TTTCATCCCT AAAAAGTGTT
CCAGATCCAG TGGCTAGAAC TCTTGTCAGC TATAGAAAGA AGCTTAAAAA GTTAACAGAA
AATTGTATTA ATTATATTCC AGATGAAGCA TGGCAATCGA GCATGGTTGA GGTAGAACAA
TCAGTTGAGA TACTAAAACT CTTTAAATTT ATAGATAATC TTCTTATACT TTGTCCGCAA
AGGTATGGAC CCTGGGGTGT AAATAAAATC CACGAGTTTC TTTTAGGAAA GAGATTTGAG
AAGGAAGTAC ACAAGTGGGT AGAGGGAACA CCAATCATGG CAAAAAGTAA TCAACCTGAA
ATAGGTTTAG CGAATGGAGA CGTTGGGATA ATTATTGGCA ACGGCGAAAA AAGACGTTTT
TTATTTAATG TTTTTTCTGA GGAACAAAGA CTAGTAACTC GATTAATAAA CCCATCAAGG
TTAAATAGAT ATGATGCGGC ATATGCAATG ACAATTCATA AAGCACAGGG GAGTGAAGCT
GATCAAGTTC TTTTACTTTG GCCAACAACC TCAAAAGTTC CAGAAGAGAA GACTTTCAAT
AAATTTTATT CTGATGATTA TGAAAAAAGA ATGCTTTACA CAGCAATAAC TCGTGCAAAA
AAACAATTAC TGGTAATTAC CAATAAAGAA GAAGACTTTT AA
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| Protein sequence | MRYSLEKLFS TDLNKSLLAT LIRYYPPIDS NEALIDIVNV LMDGLSRGDV YIDMKKIPEN
LELKYKNWPS YHMKALLDSG WTKGDNSPIV LDGDLISWRR THNEIVETIQ KILLRNQPIN
NLSKELPVRI DDKNLAHLNI QQKEAVNLVK SEQIILLSGG PGTGKTSTIL QMLLQALTRN
PTLDIAMAAP TGKAAKKLKD TIQAGIEDFD DPVKDKLSNI PSKTLHKWLE ASPNGFRRNS
QRLLKLDLIV IDEMSMVDLP TINGLLDALT KSCQIILVGD PDQLLPIGSG GIWQILQEKK
TKTHFHANSV KLTKSYRNKG DIALLRNTLK DKGVDAFWHL LSTKEDSTNT LKYLSSLKSV
PDPVARTLVS YRKKLKKLTE NCINYIPDEA WQSSMVEVEQ SVEILKLFKF IDNLLILCPQ
RYGPWGVNKI HEFLLGKRFE KEVHKWVEGT PIMAKSNQPE IGLANGDVGI IIGNGEKRRF
LFNVFSEEQR LVTRLINPSR LNRYDAAYAM TIHKAQGSEA DQVLLLWPTT SKVPEEKTFN
KFYSDDYEKR MLYTAITRAK KQLLVITNKE EDF
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