| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14681 |
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| Symbol | crtH |
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| ID | 4780674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1175222 |
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| End bp | 1176784 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640084749 |
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| Product | putative carotenoid isomerase |
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| Protein accession | YP_001015290 |
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| Protein GI | 124026174 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.314761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.880307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT CATCAAATAA AGCCAACGAT TCTTGCAAGT GGGATTCAAT AGTTATTGGT
TCCGGTCTGG GTGGATTAGT AACTGCAAGT CAACTAGCAA GCAAAGGTGC AAAGGTGCTT
GTTCTAGAAC AGTATAAGAT TCCGGGTGGA AGTGGTGGAT CATTTAAAAG AAAAGGATTT
ACTTTTGATG TTGGAGCATC AATGATCTTT GGGTTTGGTG ATAAGGGATA CACAAATTTA
CTAACGAGAG CTCTTAAAGA TGTTGGACAA AAATGTGAAA CGATTCCTGA CCCAACACAA
TTGGCATATC ATCTACCCAA TCAATTAGAA ATTTCAGTTG ATAGAGATTA TCAAAAATTT
ATTACCAAGC TAATAAATTT ATTTCCGCAT GAAGAGAAAG GAATAAAACA TTTTTACGAA
ACATGTTGGG ATGTATTTAA TTGTCTAGAT TCAATGCCTT TACTTTCAAT AGAGGATCCT
GCGTATCTAA TGAAAGTTTT TTTTAAATCA CCTTTATCAT GTCTTGGACT GGCTAGGTGG
TTGCCAGTTA ATGCTGGTGA TGTTGCTAGG CGATATATTA AAGATCCTGA TCTTTTAAGG
TTTATAGATA TTGAATGTTT CTGCTGGTCA GTTATGCCTG CCAACTTGAC TCCTATGATA
AATGCAGGAA TGGTCTTTTC TGATAGACAT TATGGAGGTA TTAACTACCC CAAAGGAGGT
GTAGGAATTA TTGCAGAAAA GCTAGTGAAG GGAATTAAAA ATCTGGGGGG GGAAGTTAGA
TATAAATCCA GAGTAAAAAA AATAATTTTG GAAAACGGAA ATGCCATAGG TGTTTCACTT
GAAAATGATG AAGAAATTTT CAGTAAAACA GTGGTCTCTA ATGCTACAAG ATGGGATACT
TTTGGTGGTC AAGGGATTAA GAGTCCACTT ATACCAACAG AGAACAAACC AACGTCTGAG
AAAAAATGGG AAAACAGATA TATACCTTCC CCTTCATTCT TATCTCTACA TTTGGGAGTG
AATGAAGACT CTATACATGC TAACACTCAT TGCCATCATC TACTTCTCGA CAAATGGGAA
GAAATGGAGA AAGAACAGGG AGTTACTTTC GTATCAATAC CAACTCTCTT AGATCCCACA
TTGGCACCTT CAGGTAGCCA TATTGTTCAT GCTTTTACTC CTTCTTCAAT AGATAACTGG
GATGGATTAA GCAATAAAGA ATATCTTACA AAGAAAAAAG AAGATGGTGA TAAACTTATT
TCAAAGTTAG AGAGATTATT TCCTAACCTA AGTCAAAATA TTCTTCACAA AGAAATAGGA
AGTCCAAGAA CTCATAAAAG ATTCCTTGCA AGAAACAAAG GAAGTTATGG ACCAATTCCA
TCAATGAGAT TGCCGGGCCT TCTCCCCATG CCATTCAACA CTACTAAAAT TAATGGACTT
TATTGTGTTG GGGACTCGTG CTTCCCCGGT CAAGGTTTGA ATGCCGTGGC TTTCAGTGGT
TATGCCTGTG CTCACAAGAT AGGCACAAAG CTTGGTATGA ACAAATGGGA GCTACCAGAA
TAA
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| Protein sequence | MTQSSNKAND SCKWDSIVIG SGLGGLVTAS QLASKGAKVL VLEQYKIPGG SGGSFKRKGF
TFDVGASMIF GFGDKGYTNL LTRALKDVGQ KCETIPDPTQ LAYHLPNQLE ISVDRDYQKF
ITKLINLFPH EEKGIKHFYE TCWDVFNCLD SMPLLSIEDP AYLMKVFFKS PLSCLGLARW
LPVNAGDVAR RYIKDPDLLR FIDIECFCWS VMPANLTPMI NAGMVFSDRH YGGINYPKGG
VGIIAEKLVK GIKNLGGEVR YKSRVKKIIL ENGNAIGVSL ENDEEIFSKT VVSNATRWDT
FGGQGIKSPL IPTENKPTSE KKWENRYIPS PSFLSLHLGV NEDSIHANTH CHHLLLDKWE
EMEKEQGVTF VSIPTLLDPT LAPSGSHIVH AFTPSSIDNW DGLSNKEYLT KKKEDGDKLI
SKLERLFPNL SQNILHKEIG SPRTHKRFLA RNKGSYGPIP SMRLPGLLPM PFNTTKINGL
YCVGDSCFPG QGLNAVAFSG YACAHKIGTK LGMNKWELPE
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