Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_10301 |
Symbol | |
ID | 4779350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 950259 |
End bp | 950801 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640084308 |
Product | hypothetical protein |
Protein accession | YP_001014853 |
Protein GI | 124025737 |
COG category | [S] Function unknown |
COG ID | [COG5135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00037794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCACCAT GGTTTACTCA ACTTAGCTCA GTTCAGAGAA AAGAATCAAA ATTAGACTCT TCAAGATGGC TACAACTAGC CACAATTGGA ATAGATAATA ATCCCAGAGT AAGAACAGTA GTTTTTAGAG GATGGAGTAA ATCCTATGAA ATGGAAATAT ATACTGACAA AAGAAGTCAA AAATATCATG AATTAAATTT GAACAATAAC GTAGAAATAT GCTGGCTTTT TTCAAGATCA AAATGTCAAT TCAGGTTTAG AGGAACTTCA ACAATTGAAT CAGATAAATA CAACCTTCTA CATTGGGAAA AACTAACTGA ACAATCTAGA TTAATGTGGA GTTGGCCAAC TCCAGGTAAT CAATTTAATC TTGAAAAAAC TAATGATTTT TCTGTCAAAT CAATTAAAGA GTTATCAAAT AATTTCACTG TATTAAAGAT TAAAATCAAC CATGTTGACC AATTGCTTCT TCGTAAACCT GTTCATACAA GAAGAAGGTG GATACGTGCT AATGACTGGA AAGAAGAAAG TATAAACCCT TAA
|
Protein sequence | MPPWFTQLSS VQRKESKLDS SRWLQLATIG IDNNPRVRTV VFRGWSKSYE MEIYTDKRSQ KYHELNLNNN VEICWLFSRS KCQFRFRGTS TIESDKYNLL HWEKLTEQSR LMWSWPTPGN QFNLEKTNDF SVKSIKELSN NFTVLKIKIN HVDQLLLRKP VHTRRRWIRA NDWKEESINP
|
| |