| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09901 |
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| Symbol | ribB |
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| ID | 4781257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 908462 |
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| End bp | 910147 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640084268 |
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| Product | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein |
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| Protein accession | YP_001014813 |
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| Protein GI | 124025697 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.089208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.190435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCAG AAGATTGTTA TGAAATTGAA TTTGATGATA TTGCAGATGC ACTAGCTGCT
ATCAGAAATG GTGAATGTGT TGTTGTGGTT GATGATGAAA AGAGAGAAAA CGAAGGCGAT
TTAATATGTG CTGCTCAATT TGCGACTCCC CAGCAAATAA ATTTCATGGC AACAGAGGCT
AGAGGTTTGA TATGTCTAGC AATGCAAGGG GAAAGATTAG ACGAATTAGA TCTTCCTTTA
ATGGTTGACA GAAATACCGA TTCAAACCAA ACAGCATTCA CTGTAAGTAT CGATGCAGGT
CCTGAATTTG GAGTATCTAC GGGCATTTCA GCTGAAGATA GAGCTAAAAC AATTCAAGTT
GCTCTTAATA GTCAAACAAA ACCAATTGAT TTAAGAAGAC CCGGTCATAT TTTCCCTTTA
AGAGCAAAAA TTGGAGGAGT ATTAAAAAGG GCTGGACATA CGGAAGCGGC AGTAGACCTA
TCTTTGTTAG CAGGCTTATC TCCTGCGGGC GTTATCTGTG AAATTCAAAA TCTGGATGGC
TCAATGGCAA GATTGCCTGA GTTAAAAAAA TATGCGCAAG AAAGAAAATT AAAGTTGATC
AGTATTGCAG ATTTAATTCA CTACAGACTT GAAAATGAGA GATTTGTCTA CAGACAAGCA
GTAGCAAAGT TGCCTAGCCT ATTTGGAGAT TTCAAGGCAA TCGGTTACAA GAATGAATTG
GATGGATCAG AACATGTCGC GATAATAAAA GGAAATCCAG AAAATTTAAA AGAGCCGGTA
TTGGTAAGAA TGCACTCAGA GTGTCTAACA GGAGACGCAT TTGGATCATT AAGGTGTGAT
TGTCGGCCTC AATTAGAAGC TGCCTTGTCA AGAATTTCAG AAGAAGGAGA AGGAGTTGTT
GTCTATCTAA GGCAGGAAGG TAGAGGTATA GGTTTAGTTA ACAAATTAAA AGCCTATAAT
CTTCAAGATG GAGGATTAGA TACTGTTGAA GCCAATGAGA AATTAGGTTT TCCTGCAGAT
TTGAGAAACT ATGGAGTGGG GGCGCAAATA TTGACAGATT TAGGAATAAA TAGACTTAAA
TTACTAACAA ATAATCCTAG AAAAATAGCT GGTCTTGGTG GATATGGTCT TCAAGTTGAA
TCTAGAGTTC CATTAGTTAT TTGCCCCGGA GATCATAATG CGGCTTATCT TGAGGTAAAA
AGAGAAAAAC TTGGACACTT AATTGATAAT AATATTCAGA CAAATTTAAC CAATGAAAGA
CAAAATATTG TTGTCTATTG GGATGGAAAA GTTAACGACA GTGAATTAAA ACATTTTGAA
AATAAAGCAT GTAAGTGGTC AGAAAACCAT TTTTTAAATA TTTCTATTCA AACAGCTCCA
AGGTTAATAG CTCTATGTGA AAACCCATTA TTCATTTGGA ATGTTAGACA TAGAGATATC
AAAACACATT TGGAAGGTAA CTTTATAGAT AAAAGATTGC TTGAGTCACT ACTTAAGGAG
CTTAGCAATT GGAAAAATAC AGAAAGAGTT GGAATAATTA AAACTGACAA TTATGAAAGG
CTTTTACATC CATCTTCAAA TATAACTATA GAGTCAAAAA AAATAAGCGA ACTTTCAAAT
TTTGAAAATT CGCCATTATT TGATTGGAAT TTAAAAGATA AGACCAGTAC TTTCGAATGG
AGTTAA
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| Protein sequence | MKSEDCYEIE FDDIADALAA IRNGECVVVV DDEKRENEGD LICAAQFATP QQINFMATEA
RGLICLAMQG ERLDELDLPL MVDRNTDSNQ TAFTVSIDAG PEFGVSTGIS AEDRAKTIQV
ALNSQTKPID LRRPGHIFPL RAKIGGVLKR AGHTEAAVDL SLLAGLSPAG VICEIQNLDG
SMARLPELKK YAQERKLKLI SIADLIHYRL ENERFVYRQA VAKLPSLFGD FKAIGYKNEL
DGSEHVAIIK GNPENLKEPV LVRMHSECLT GDAFGSLRCD CRPQLEAALS RISEEGEGVV
VYLRQEGRGI GLVNKLKAYN LQDGGLDTVE ANEKLGFPAD LRNYGVGAQI LTDLGINRLK
LLTNNPRKIA GLGGYGLQVE SRVPLVICPG DHNAAYLEVK REKLGHLIDN NIQTNLTNER
QNIVVYWDGK VNDSELKHFE NKACKWSENH FLNISIQTAP RLIALCENPL FIWNVRHRDI
KTHLEGNFID KRLLESLLKE LSNWKNTERV GIIKTDNYER LLHPSSNITI ESKKISELSN
FENSPLFDWN LKDKTSTFEW S
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